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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S3...' > 

Gene Card

Best human hits

YY1; YY2; ZFP42

Species

C.savignyi

Unique Gene ID

Cisavi.g00000783

Gene Model ID

Cisavi.CG.ENS81.R1.623513-627531

Location

R1:623512..627531

Transcript Models and Sequences

  Cisavi.CG.ENS81.R1.623513-627531.05311.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
YY-1-like PIRSF C2H2-type Zinc finger protein, YY-1-like
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

54 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
four-way junction DNA binding Hs molecular function
double-strand break repair via homologous recombination Hs biological process
nuclear chromatin Hs cellular component
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
core promoter proximal region sequence-specific DNA binding Hs molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
enhancer sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription coactivator activity Hs molecular function
transcription corepressor activity Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
cytoplasm Hs cellular component
DNA repair Hs biological process
DNA recombination Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
transcription from RNA polymerase II promoter Hs biological process
RNA localization Hs biological process
cellular response to DNA damage stimulus Hs biological process
spermatogenesis Hs biological process
zinc ion binding Hs molecular function
male gonad development Hs biological process
female gonad development Hs biological process
anterior/posterior pattern specification Hs biological process
response to UV-C Hs biological process
positive regulation of gene expression Hs biological process
negative regulation of gene expression Hs biological process
nuclear matrix Hs cellular component
protein deubiquitination Hs biological process
cell differentiation Hs biological process
Ino80 complex Hs cellular component
PcG protein complex Hs cellular component
cellular response to UV Hs biological process
histone deacetylase binding Hs molecular function
sequence-specific DNA binding Hs molecular function
transcription regulatory region DNA binding Hs molecular function
positive regulation of transcription from RNA polymerase II promoter Hs biological process
SMAD binding Hs molecular function
metal ion binding Hs molecular function
camera-type eye morphogenesis Hs biological process
chromosome organization Hs biological process
meiotic cell cycle Hs biological process
cellular response to interleukin-1 Hs biological process
negative regulation of pri-miRNA transcription from RNA polymerase II promoter Hs biological process

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
four-way junction DNA binding Hs molecular function 302 8.17e-101
nuclear chromatin Hs cellular component 302 8.17e-101
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 302 8.17e-101
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 302 8.17e-101
core promoter proximal region sequence-specific DNA binding Hs molecular function 302 8.17e-101
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 302 8.17e-101
enhancer sequence-specific DNA binding Hs molecular function 302 8.17e-101
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 266 1.71e-87
nucleic acid binding Hs molecular function 302 8.17e-101
DNA binding Hs molecular function 302 8.17e-101
transcription factor activity, sequence-specific DNA binding Hs molecular function 302 8.17e-101
transcription coactivator activity Hs molecular function 302 8.17e-101
transcription corepressor activity Hs molecular function 302 8.17e-101
RNA binding Hs molecular function 302 8.17e-101
protein binding Hs molecular function 302 8.17e-101
nucleus Hs cellular component 302 8.17e-101
nucleoplasm Hs cellular component 302 8.17e-101
transcription factor complex Hs cellular component 302 8.17e-101
cytoplasm Hs cellular component 302 8.17e-101
zinc ion binding Hs molecular function 302 8.17e-101
nuclear matrix Hs cellular component 302 8.17e-101
Ino80 complex Hs cellular component 302 8.17e-101
PcG protein complex Hs cellular component 302 8.17e-101
histone deacetylase binding Hs molecular function 302 8.17e-101
sequence-specific DNA binding Hs molecular function 302 8.17e-101
transcription regulatory region DNA binding Hs molecular function 302 8.17e-101
SMAD binding Hs molecular function 302 8.17e-101
metal ion binding Hs molecular function 302 8.17e-101

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 8.4E-4

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