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Gene Card

Best human hits

GRWD1; RBBP4; RBBP7

Species

B.schlosseri

Unique Gene ID

Boschl.g00053691

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g53691

Location

chrUn:327179448..327180627

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g53691.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
WD40_repeat_CS ProSitePatterns WD40 repeat, conserved site
WD40/YVTN_repeat-like_dom_sf Gene3D WD40/YVTN repeat-like-containing domain superfamily
G-protein_beta_WD-40_rep PRINTS G-protein beta WD-40 repeat
WD40_repeat ProSiteProfiles WD40 repeat
WD40_repeat_dom_sf SUPERFAMILY WD40-repeat-containing domain superfamily
WD40_repeat Pfam WD40 repeat
WD40_repeat SMART WD40 repeat
Histone-bd_RBBP4_N Pfam Histone-binding protein RBBP4, N-terminal
WD40_repeat_dom ProSiteProfiles WD40-repeat-containing domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

40 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
nuclear chromatin Hs cellular component
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function
RNA binding Hs molecular function
histone deacetylase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytosol Hs cellular component
DNA replication Hs biological process
chromatin organization Hs biological process
DNA replication-independent nucleosome assembly Hs biological process
chromatin remodeling Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
cell cycle Hs biological process
multicellular organism development Hs biological process
DNA-dependent ATPase activity Hs molecular function
cell proliferation Hs biological process
negative regulation of cell proliferation Hs biological process
histone deacetylation Hs biological process
Sin3 complex Hs cellular component
NuRD complex Hs cellular component
NURF complex Hs cellular component
negative regulation of cell growth Hs biological process
nucleosomal DNA binding Hs molecular function
chromatin assembly Hs biological process
macromolecular complex Hs cellular component
CAF-1 complex Hs cellular component
CENP-A containing nucleosome assembly Hs biological process
ESC/E(Z) complex Hs cellular component
histone binding Hs molecular function
histone deacetylase binding Hs molecular function
ATP-dependent chromatin remodeling Hs biological process
post-translational protein modification Hs biological process
negative regulation of gene expression, epigenetic Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
response to steroid hormone Hs biological process
regulation of cell cycle Hs biological process

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nuclear chromatin Hs cellular component 643 0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 643 0.0
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 643 0.0
chromatin binding Hs molecular function 110 8.76e-27
DNA replication origin binding Hs molecular function 110 8.76e-27
RNA binding Hs molecular function 620 0.0
histone deacetylase activity Hs molecular function 643 0.0
protein binding Hs molecular function 643 0.0
nucleus Hs cellular component 643 0.0
nucleoplasm Hs cellular component 643 0.0
chromosome Hs cellular component 110 8.76e-27
nucleolus Hs cellular component 110 8.76e-27
cytosol Hs cellular component 643 0.0
DNA-dependent ATPase activity Hs molecular function 643 0.0
Sin3 complex Hs cellular component 643 0.0
NuRD complex Hs cellular component 643 0.0
NURF complex Hs cellular component 643 0.0
nucleosomal DNA binding Hs molecular function 643 0.0
macromolecular complex Hs cellular component 643 0.0
CAF-1 complex Hs cellular component 643 0.0
ESC/E(Z) complex Hs cellular component 643 0.0
histone binding Hs molecular function 643 0.0
histone deacetylase binding Hs molecular function 643 0.0

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Gene3D molecular function 1.2E-141

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