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GENE CARD

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Gene Card

Best human hits

PBX1; PBX2

Species

B.schlosseri

Unique Gene ID

Boschl.g00002058

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g02058

Location

chrUn:13342865..13346900

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g02058.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Homeobox_dom CDD Homeobox domain
PBX Pfam PBX
Homeobox_dom Pfam Homeobox domain
Homeobox_dom SMART Homeobox domain
Homeobox_CS ProSitePatterns Homeobox, conserved site
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
Homeobox_dom ProSiteProfiles Homeobox domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

51 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
urogenital system development Hs biological process
branching involved in ureteric bud morphogenesis Hs biological process
DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
cytoplasm Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
steroid biosynthetic process Hs biological process
positive regulation of transcription of Notch receptor target Hs biological process
multicellular organism development Hs biological process
sex differentiation Hs biological process
transcription factor binding Hs molecular function
positive regulation of cell proliferation Hs biological process
animal organ morphogenesis Hs biological process
anterior/posterior pattern specification Hs biological process
proximal/distal pattern formation Hs biological process
positive regulation of G2/M transition of mitotic cell cycle Hs biological process
cell differentiation Hs biological process
regulation of ossification Hs biological process
adrenal gland development Hs biological process
embryonic limb morphogenesis Hs biological process
somatic stem cell population maintenance Hs biological process
embryonic hemopoiesis Hs biological process
regulation of cell proliferation Hs biological process
sequence-specific DNA binding Hs molecular function
negative regulation of neuron differentiation Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
protein heterodimerization activity Hs molecular function
thymus development Hs biological process
embryonic organ development Hs biological process
embryonic skeletal system development Hs biological process
RNA polymerase II transcription factor complex Hs cellular component
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function
XY body Hs cellular component
chromatin binding Hs molecular function
regulation of transcription from RNA polymerase II promoter Hs biological process
adult locomotory behavior Hs biological process
dorsal spinal cord development Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
neuron development Hs biological process

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 279 1.27e-93
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 279 1.27e-93
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 279 1.27e-93
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 279 1.27e-93
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 273 2.23e-91
DNA binding Hs molecular function 279 1.27e-93
transcription factor activity, sequence-specific DNA binding Hs molecular function 279 1.27e-93
protein binding Hs molecular function 279 1.27e-93
nucleus Hs cellular component 279 1.27e-93
nucleoplasm Hs cellular component 279 1.27e-93
transcription factor complex Hs cellular component 279 1.27e-93
cytoplasm Hs cellular component 279 1.27e-93
transcription factor binding Hs molecular function 273 2.23e-91
sequence-specific DNA binding Hs molecular function 279 1.27e-93
protein heterodimerization activity Hs molecular function 279 1.27e-93
RNA polymerase II transcription factor complex Hs cellular component 279 1.27e-93

GO (InterProScan)

5 results

GO Term Analysis Type e-value
DNA binding SUPERFAMILY molecular function 1.03E-20
transcription factor activity, sequence-specific DNA binding Pfam molecular function 4.2E-30
nucleus Pfam cellular component 4.2E-30
regulation of transcription, DNA-templated ProSitePatterns biological process
sequence-specific DNA binding ProSitePatterns molecular function

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