Gene Card
Best human hits
SHMT1; SHMT2
Species
Unique Gene ID
Boschl.g00058350
Gene Model ID
Boschl.CG.Botznik2013.chr6.g58350
Location
chr6:3545327..3550826
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
6 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Ser_HO-MeTrfase_PLP_BS | ProSitePatterns | Serine hydroxymethyltransferase, pyridoxal phosphate binding site |
| PyrdxlP-dep_Trfase_dom1 | Gene3D | Pyridoxal phosphate-dependent transferase domain 1 |
| PyrdxlP-dep_Trfase_major | Gene3D | Pyridoxal phosphate-dependent transferase, major domain |
| PyrdxlP-dep_Trfase | SUPERFAMILY | Pyridoxal phosphate-dependent transferase |
| Ser_HO-MeTrfase | PIRSF | Serine hydroxymethyltransferase |
| Ser_HO-MeTrfase | CDD | Serine hydroxymethyltransferase |
| GO Term | Annotation Origin | Type |
|---|
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
27 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| translation repressor activity, nucleic acid binding | Hs | molecular function | 578 | 0.0 |
| chromatin binding | Hs | molecular function | 511 | 6.04e-180 |
| catalytic activity | Hs | molecular function | 578 | 0.0 |
| glycine hydroxymethyltransferase activity | Hs | molecular function | 578 | 0.0 |
| thiol-dependent ubiquitin-specific protease activity | Hs | molecular function | 578 | 0.0 |
| protein binding | Hs | molecular function | 578 | 0.0 |
| nucleus | Hs | cellular component | 578 | 0.0 |
| cytoplasm | Hs | cellular component | 578 | 0.0 |
| mitochondrion | Hs | cellular component | 578 | 0.0 |
| mitochondrial inner membrane | Hs | cellular component | 511 | 6.04e-180 |
| mitochondrial intermembrane space | Hs | cellular component | 511 | 6.04e-180 |
| mitochondrial matrix | Hs | cellular component | 511 | 6.04e-180 |
| cytosol | Hs | cellular component | 578 | 0.0 |
| methyltransferase activity | Hs | molecular function | 511 | 6.04e-180 |
| L-allo-threonine aldolase activity | Hs | molecular function | 578 | 0.0 |
| microtubule cytoskeleton | Hs | cellular component | 511 | 6.04e-180 |
| membrane | Hs | cellular component | 511 | 6.04e-180 |
| amino acid binding | Hs | molecular function | 578 | 0.0 |
| transferase activity | Hs | molecular function | 578 | 0.0 |
| pyridoxal phosphate binding | Hs | molecular function | 578 | 0.0 |
| mitochondrial nucleoid | Hs | cellular component | 511 | 6.04e-180 |
| identical protein binding | Hs | molecular function | 578 | 0.0 |
| protein homodimerization activity | Hs | molecular function | 578 | 0.0 |
| mRNA 5'-UTR binding | Hs | molecular function | 578 | 0.0 |
| extracellular exosome | Hs | cellular component | 578 | 0.0 |
| BRISC complex | Hs | cellular component | 511 | 6.04e-180 |
| serine binding | Hs | molecular function | 578 | 0.0 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| catalytic activity | Gene3D | molecular function | 4.1E-183 |
| glycine hydroxymethyltransferase activity | CDD | molecular function | 0.0 |
| glycine biosynthetic process from serine | CDD | biological process | 0.0 |
| pyridoxal phosphate binding | CDD | molecular function | 0.0 |
| tetrahydrofolate interconversion | CDD | biological process | 0.0 |
