Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

VPS29

Species

B.leachii

Unique Gene ID

Boleac.g00011191

Gene Model ID

Boleac.CG.SB_v3.S526.g11191

Location

S526:51475..52947

Transcript Models and Sequences

  Boleac.CG.SB_v3.S526.g11191.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Metallo-depent_PP-like Gene3D Metallo-dependent phosphatase-like
Vps29 CDD Vacuolar protein sorting-associated protein 29
Phosphodiesterase_MJ0936/Vps29 TIGRFAM Phosphodiesterase MJ0936/Vps29
Calcineurin-like_PHP_lpxH Pfam Calcineurin-like phosphoesterase domain, lpxH type
Vps29 PANTHER Vacuolar protein sorting-associated protein 29
Phosphodiesterase_MJ0936/Vps29 PANTHER Phosphodiesterase MJ0936/Vps29

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 308 3.41e-108
cytoplasm Hs cellular component 308 3.41e-108
endosome Hs cellular component 308 3.41e-108
early endosome Hs cellular component 308 3.41e-108
late endosome Hs cellular component 308 3.41e-108
cytosol Hs cellular component 308 3.41e-108
zinc ion binding Hs molecular function 308 3.41e-108
protein transporter activity Hs molecular function 308 3.41e-108
endosome membrane Hs cellular component 308 3.41e-108
membrane Hs cellular component 308 3.41e-108
retromer complex Hs cellular component 308 3.41e-108
retromer, cargo-selective complex Hs cellular component 308 3.41e-108
intracellular membrane-bounded organelle Hs cellular component 308 3.41e-108
metal ion binding Hs molecular function 308 3.41e-108
extracellular exosome Hs cellular component 308 3.41e-108

GO (InterProScan)

2 results

GO Term Analysis Type e-value
retromer complex CDD cellular component 1.5995E-128
retrograde transport, endosome to Golgi CDD biological process 1.5995E-128