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GENE CARD

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Gene Card

Best human hits

CD2AP; FUT8; SH3RF3

Species

P.mammillata

Unique Gene ID

Phmamm.g00019320

Gene Model ID

Phmamm.CG.MTP2014.S8174.g19320

Location

S8174:399..1929

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S8174.g19320.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

5 results

AHC0AAA62YH11

Plate: Plate_62_H11

AHC0AAA62YK07

Plate: Plate_62_K07

AHC0AAA118YC20

Plate: Plate_118_C20

AHC0AAA145YD22

Plate: Plate_145_D22

AHC0AAA258YJ20

Plate: Plate_258_J20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
SH3-like_dom_sf SUPERFAMILY SH3-like domain superfamily
SH3_domain ProSiteProfiles SH3 domain

GOSlim

26 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
protein binding Blast molecular function
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
protein C-terminus binding Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
transferase activity Blast molecular function
cell junction Blast cellular component
cell leading edge Blast cellular component
cell projection Blast cellular component
metal ion binding Blast molecular function
perinuclear region of cytoplasm Blast cellular component
extracellular exosome Blast cellular component
plasma membrane region Blast cellular component
receptor binding Blast molecular function
organelle organization Blast biological process
structural molecule activity Blast molecular function
metabolic process Blast biological process
cytoplasmic vesicle Blast cellular component
cytoskeletal part Blast cellular component
macromolecular complex Blast cellular component
cell adhesion molecule binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 48.1 9.96e-08
ruffle Hs cellular component 37.7 5.47e-04
vascular endothelial growth factor receptor binding Hs molecular function 37.7 5.47e-04
structural constituent of cytoskeleton Hs molecular function 37.7 5.47e-04
protein binding Hs molecular function 48.1 9.96e-08
cytoplasm Hs cellular component 37.7 5.47e-04
Golgi apparatus Hs cellular component 48.1 9.96e-08
cytosol Hs cellular component 48.1 9.96e-08
cytoskeleton Hs cellular component 37.7 5.47e-04
plasma membrane Hs cellular component 37.7 5.47e-04
cell-cell junction Hs cellular component 37.7 5.47e-04
beta-catenin binding Hs molecular function 37.7 5.47e-04
protein C-terminus binding Hs molecular function 37.7 5.47e-04
glycoprotein 6-alpha-L-fucosyltransferase activity Hs molecular function 48.1 9.96e-08
actin cytoskeleton Hs cellular component 37.7 5.47e-04
membrane Hs cellular component 48.1 9.96e-08
integral component of membrane Hs cellular component 48.1 9.96e-08
transferase activity Hs molecular function 48.1 9.96e-08
transferase activity, transferring glycosyl groups Hs molecular function 48.1 9.96e-08
SH3 domain binding Hs molecular function 48.1 9.96e-08
cell junction Hs cellular component 37.7 5.47e-04
endocytic vesicle Hs cellular component 37.7 5.47e-04
cell leading edge Hs cellular component 37.7 5.47e-04
filamentous actin Hs cellular component 37.7 5.47e-04
Golgi cisterna membrane Hs cellular component 48.1 9.96e-08
cell projection Hs cellular component 37.7 5.47e-04
cadherin binding Hs molecular function 37.7 5.47e-04
metal ion binding Hs molecular function 35.4 0.004
alpha-(1->6)-fucosyltransferase activity Hs molecular function 48.1 9.96e-08
perinuclear region of cytoplasm Hs cellular component 37.7 5.47e-04
extracellular exosome Hs cellular component 48.1 9.96e-08

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 1.02E-6