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GENE CARD

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Gene Card

Best human hits

FBXL7; NLRP5; NOD2

Species

P.mammillata

Unique Gene ID

Phmamm.g00018523

Gene Model ID

Phmamm.CG.MTP2014.S4718.g18523

Location

S4718:2572..4769

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S4718.g18523.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Leu-rich_rpt_Cys-con_subtyp SMART Leucine-rich repeat, cysteine-containing subtype
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
Leu-rich_rpt Pfam Leucine-rich repeat

GOSlim

25 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
actin binding Blast molecular function
ubiquitin-protein transferase activity Blast molecular function
protein binding Blast molecular function
ATP binding Blast molecular function
nucleus Blast cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
Golgi apparatus Blast cellular component
centrosome Blast cellular component
microtubule organizing center Blast cellular component
cytosol Blast cellular component
cytoskeleton Blast cellular component
plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
basolateral plasma membrane Blast cellular component
enzyme binding Blast molecular function
protein kinase binding Blast molecular function
vesicle Blast cellular component
macromolecular complex Blast cellular component
intracellular part Blast cellular component
nuclear part Blast cellular component
carbohydrate derivative binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ubiquitin ligase complex Hs cellular component 38.9 0.002
nucleotide binding Hs molecular function 40.8 5.68e-04
actin binding Hs molecular function 38.9 0.003
ubiquitin-protein transferase activity Hs molecular function 38.9 0.002
protein binding Hs molecular function 40.8 5.68e-04
ATP binding Hs molecular function 40.8 5.68e-04
nucleus Hs cellular component 40.8 5.68e-04
nucleolus Hs cellular component 40.8 5.68e-04
cytoplasm Hs cellular component 40.8 5.68e-04
mitochondrion Hs cellular component 40.8 5.68e-04
Golgi apparatus Hs cellular component 38.9 0.003
centrosome Hs cellular component 38.9 0.002
microtubule organizing center Hs cellular component 38.9 0.002
cytosol Hs cellular component 38.9 0.002
cytoskeleton Hs cellular component 38.9 0.002
plasma membrane Hs cellular component 38.9 0.003
COP9 signalosome Hs cellular component 38.9 0.003
cell surface Hs cellular component 38.9 0.003
membrane Hs cellular component 38.9 0.003
basolateral plasma membrane Hs cellular component 38.9 0.003
SCF ubiquitin ligase complex Hs cellular component 38.9 0.002
enzyme binding Hs molecular function 38.9 0.003
protein kinase binding Hs molecular function 38.9 0.003
Hsp70 protein binding Hs molecular function 38.9 0.003
vesicle Hs cellular component 38.9 0.003
muramyl dipeptide binding Hs molecular function 38.9 0.003
macromolecular complex Hs cellular component 38.9 0.003
peptidoglycan binding Hs molecular function 38.9 0.003
CARD domain binding Hs molecular function 38.9 0.003
Hsp90 protein binding Hs molecular function 38.9 0.003

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 0.0019

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