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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

POLR3D

Species

P.mammillata

Unique Gene ID

Phmamm.g00016837

Gene Model ID

Phmamm.CG.MTP2014.S2574.g16837

Location

S2574:6652..11621

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2574.g16837.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

22 results

AHC0AAA17YF21

Plate: Plate_17_F21

AHC0AAA30YP20

Plate: Plate_30_P20

AHC0AAA51YI02

Plate: Plate_51_I02

AHC0AAA62YI01

Plate: Plate_62_I01

AHC0AAA66YD11

Plate: Plate_66_D11

AHC0AAA69YH09

Plate: Plate_69_H09

AHC0AAA74YH23

Plate: Plate_74_H23

AHC0AAA140YF20

Plate: Plate_140_F20

AHC0AAA147YI20

Plate: Plate_147_I20

AHC0AAA153YL16

Plate: Plate_153_L16

AHC0AAA156YG12

Plate: Plate_156_G12

AHC0AAA147YI18

Plate: Plate_147_I18

AHC0AAA170YN12

Plate: Plate_170_N12

AHC0AAA171YH20

Plate: Plate_171_H20

AHC0AAA178YD03

Plate: Plate_178_D03

AHC0AAA189YP18

Plate: Plate_189_P18

AHC0AAA215YA06

Plate: Plate_215_A06

AHC0AAA220YJ23

Plate: Plate_220_J23

AHC0AAA226YH18

Plate: Plate_226_H18

AHC0AAA248YF15

Plate: Plate_248_F15

AHC0AAA254YP08

Plate: Plate_254_P08

AHC0AAA261YI18

Plate: Plate_261_I18

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
RPC4 Pfam DNA-directed RNA polymerase III subunit RPC4
RPC4 PANTHER DNA-directed RNA polymerase III subunit RPC4

GOSlim

13 results

GO Term Annotation Origin Type
DNA binding Blast molecular function
chromatin binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytosol Blast cellular component
nuclear speck Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
transcription, DNA-templated Blast biological process
transferase activity, transferring phosphorus-containing groups Blast molecular function
RNA biosynthetic process Blast biological process
nuclear part Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 123 9.12e-32
RNA polymerase III activity Hs molecular function 123 9.12e-32
DNA binding Hs molecular function 123 9.12e-32
chromatin binding Hs molecular function 123 9.12e-32
DNA-directed 5'-3' RNA polymerase activity Hs molecular function 123 9.12e-32
nucleus Hs cellular component 123 9.12e-32
nucleoplasm Hs cellular component 123 9.12e-32
DNA-directed RNA polymerase III complex Hs cellular component 123 9.12e-32
cytosol Hs cellular component 123 9.12e-32
nuclear speck Hs cellular component 123 9.12e-32

GO (InterProScan)

4 results

GO Term Analysis Type e-value
DNA binding PANTHER molecular function 1.3E-46
DNA-directed 5'-3' RNA polymerase activity PANTHER molecular function 1.3E-46
DNA-directed RNA polymerase III complex PANTHER cellular component 1.3E-46
transcription from RNA polymerase III promoter PANTHER biological process 1.3E-46