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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

ESRP1; ESRP2; GRSF1

Species

P.mammillata

Unique Gene ID

Phmamm.g00015699

Gene Model ID

Phmamm.CG.MTP2014.S1813.g15699

Location

S1813:9346..11516

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1813.g15699.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

23 results

AHC0AAA19YB21

Plate: Plate_19_B21

AHC0AAA6YP05

Plate: Plate_6_P05

AHC0AAA28YG01

Plate: Plate_28_G01

AHC0AAA38YF01

Plate: Plate_38_F01

AHC0AAA42YF20

Plate: Plate_42_F20

AHC0AAA50YJ16

Plate: Plate_50_J16

AHC0AAA117YE01

Plate: Plate_117_E01

AHC0AAA122YD24

Plate: Plate_122_D24

AHC0AAA123YG05

Plate: Plate_123_G05

AHC0AAA137YH22

Plate: Plate_137_H22

AHC0AAA140YP20

Plate: Plate_140_P20

AHC0AAA147YI11

Plate: Plate_147_I11

AHC0AAA89YP03

Plate: Plate_89_P03

AHC0AAA91YO16

Plate: Plate_91_O16

AHC0AAA147YI09

Plate: Plate_147_I09

AHC0AAA177YC06

Plate: Plate_177_C06

AHC0AAA178YC08

Plate: Plate_178_C08

AHC0AAA183YM02

Plate: Plate_183_M02

AHC0AAA189YB08

Plate: Plate_189_B08

AHC0AAA218YJ03

Plate: Plate_218_J03

AHC0AAA229YK03

Plate: Plate_229_K03

AHC0AAA266YN20

Plate: Plate_266_N20

AHC0AAA38YH03

Plate: Plate_38_H03

WashU Genome Browser

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
RRM_dom Pfam RNA recognition motif domain
RRM_dom SMART RNA recognition motif domain
ESRP2 PANTHER Epithelial splicing regulatory protein 2

GOSlim

18 results

GO Term Annotation Origin Type
nucleic acid binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Blast cellular component
mitochondrion Blast cellular component
mRNA processing Orthology biological process
RNA splicing Orthology biological process
nuclear body Orthology cellular component
mRNA splicing, via spliceosome Orthology biological process
cell surface receptor signaling pathway Orthology biological process
cellular response to organic substance Orthology biological process
regulation of gene expression Orthology biological process
positive regulation of cell proliferation Orthology biological process
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component
mitochondrial matrix Blast cellular component

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
alternative mRNA splicing, via spliceosome Hs biological process
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
mRNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
mRNA processing Hs biological process
RNA splicing Hs biological process
fibroblast growth factor receptor signaling pathway Hs biological process
nuclear body Hs cellular component
regulation of RNA splicing Hs biological process
positive regulation of epithelial cell proliferation Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 191 4.11e-55
RNA binding Hs molecular function 191 4.11e-55
mRNA binding Hs molecular function 191 4.11e-55
protein binding Hs molecular function 191 4.11e-55
nucleus Hs cellular component 191 4.11e-55
nucleoplasm Hs cellular component 191 4.11e-55
cytoplasm Hs cellular component 92.8 1.13e-20
mitochondrion Hs cellular component 92.8 1.13e-20
nuclear body Hs cellular component 191 4.11e-55
ribonucleoprotein granule Hs cellular component 92.8 1.13e-20
mitochondrial nucleoid Hs cellular component 92.8 1.13e-20

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 3.98E-13
regulation of RNA splicing PANTHER biological process 6.1E-67