Gene Card
Best human hits
TBX2; TBX3; TBX4
Species
Unique Gene ID
Phmamm.g00015327
Gene Model ID
Phmamm.CG.MTP2014.S1645.g15327
Location
S1645:10252..12965
Transcript Models and Sequences
Phmamm.CG.MTP2014.S1645.g15327.01.t
Phmamm.CG.MTP2014.S1645.g15327.02.t
Genoscope Yasuo Villefranche
4 results
AHC0AAA72YA20
Plate: Plate_72_A20
AHC0AAA163YM16
Plate: Plate_163_M16
AHC0AAA188YF21
Plate: Plate_188_F21
AHC0AAA211YE09
Plate: Plate_211_E09
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
10 results
| IPR Term | Analysis | Definition |
|---|---|---|
| TF_T-box | SMART | Transcription factor, T-box |
| T-box_sf | Gene3D | T-box superfamily |
| p53-like_TF_DNA-bd | SUPERFAMILY | p53-like transcription factor, DNA-binding |
| TF_T-box | ProSiteProfiles | Transcription factor, T-box |
| TF_T-box | CDD | Transcription factor, T-box |
| TF_T-box_CS | ProSitePatterns | Transcription factor, T-box, conserved site |
| TF_T-box | Pfam | Transcription factor, T-box |
| TF_T-box | PANTHER | Transcription factor, T-box |
| TF_T-box | PRINTS | Transcription factor, T-box |
| TF_Brachyury | PRINTS | Transcription factor, Brachyury |
GOSlim
11 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Blast | molecular function |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| transcription factor activity, sequence-specific DNA binding | Blast | molecular function |
| protein binding | Blast | molecular function |
| nucleus | Blast | cellular component |
| regulation of transcription, DNA-templated | InterProScan | biological process |
| sequence-specific DNA binding | Blast | molecular function |
| transcription factor binding | Blast | molecular function |
| intracellular part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
11 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 248 | 4.65e-75 |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 248 | 4.65e-75 |
| transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding | Hs | molecular function | 248 | 4.65e-75 |
| RNA polymerase II transcription factor binding | Hs | molecular function | 239 | 1.06e-71 |
| RNA polymerase II activating transcription factor binding | Hs | molecular function | 239 | 1.06e-71 |
| DNA binding | Hs | molecular function | 248 | 4.65e-75 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 248 | 4.65e-75 |
| protein binding | Hs | molecular function | 248 | 4.65e-75 |
| nucleus | Hs | cellular component | 248 | 4.65e-75 |
| transcription factor complex | Hs | cellular component | 248 | 4.65e-75 |
| sequence-specific DNA binding | Hs | molecular function | 248 | 4.65e-75 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| transcription factor activity, sequence-specific DNA binding | PANTHER | molecular function | 3.1E-122 |
| nucleus | PANTHER | cellular component | 3.1E-122 |
| regulation of transcription, DNA-templated | PANTHER | biological process | 3.1E-122 |
