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Gene Card

Best human hits

NUBP1; NUBP2; NUBPL

Species

P.mammillata

Unique Gene ID

Phmamm.g00014987

Gene Model ID

Phmamm.CG.MTP2014.S1508.g14987

Location

S1508:19864..21207

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1508.g14987.01.t
Phmamm.CG.MTP2014.S1508.g14987.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

8 results

AHC0AAA34YK21

Plate: Plate_34_K21

AHC0AAA38YM09

Plate: Plate_38_M09

AHC0AAA61YA09

Plate: Plate_61_A09

AHC0AAA123YO10

Plate: Plate_123_O10

AHC0AAA156YJ15

Plate: Plate_156_J15

AHC0AAA94YI14

Plate: Plate_94_I14

AHC0AAA259YM08

Plate: Plate_259_M08

AHC0AAA38YO11

Plate: Plate_38_O11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Mrp/NBP35_ATP-bd PANTHER Mrp/NBP35 ATP-binding protein
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
NUBP1/Nbp35 Hamap Cytosolic Fe-S cluster assembly factor NUBP1/Nbp35
Mrp/NBP35_ATP-bd CDD Mrp/NBP35 ATP-binding protein
Mrp/NBP35_ATP-bd Hamap Mrp/NBP35 ATP-binding protein
YlxH/NBP35 Pfam Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35

GOSlim

27 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Blast cellular component
mitochondrial matrix Blast cellular component
microtubule organizing center Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
plasma membrane Orthology cellular component
cell projection organization Orthology biological process
cell projection Orthology cellular component
metal ion binding Orthology molecular function
extracellular exosome Orthology cellular component
cytoplasmic part Orthology cellular component
organelle Orthology cellular component
plasma membrane region Orthology cellular component
macromolecular complex Orthology cellular component
cellular process Orthology biological process
cell Orthology cellular component
organelle organization Orthology biological process
microtubule-based process Orthology biological process
cellular metabolic process Orthology biological process
cofactor binding Orthology molecular function
cellular protein localization Orthology biological process
centrosome Blast cellular component

GO (Orthology)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
centriole Hs cellular component
microtubule organizing center Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
cilium Hs cellular component
cellular iron ion homeostasis Hs biological process
negative regulation of centrosome duplication Hs biological process
cell growth Hs biological process
iron-sulfur cluster assembly Hs biological process
cell projection organization Hs biological process
cell projection Hs cellular component
metal ion binding Hs molecular function
iron-sulfur cluster binding Hs molecular function
4 iron, 4 sulfur cluster binding Hs molecular function
centrosome localization Hs biological process
extracellular exosome Hs cellular component
protein localization to cell cortex Hs biological process

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 439 4.18e-156
protein binding Hs molecular function 439 4.18e-156
ATP binding Hs molecular function 439 4.18e-156
nucleus Hs cellular component 439 4.18e-156
cytoplasm Hs cellular component 439 4.18e-156
mitochondrion Hs cellular component 186 6.33e-57
mitochondrial matrix Hs cellular component 186 6.33e-57
centriole Hs cellular component 439 4.18e-156
microtubule organizing center Hs cellular component 439 4.18e-156
cytosol Hs cellular component 439 4.18e-156
cytoskeleton Hs cellular component 439 4.18e-156
plasma membrane Hs cellular component 439 4.18e-156
cilium Hs cellular component 439 4.18e-156
spindle pole centrosome Hs cellular component 275 3.43e-92
cell projection Hs cellular component 439 4.18e-156
metal ion binding Hs molecular function 439 4.18e-156
iron-sulfur cluster binding Hs molecular function 439 4.18e-156
4 iron, 4 sulfur cluster binding Hs molecular function 439 4.18e-156
extracellular exosome Hs cellular component 439 4.18e-156

GO (InterProScan)

3 results

GO Term Analysis Type e-value
iron-sulfur cluster assembly Hamap biological process 49.452
iron-sulfur cluster binding Hamap molecular function 49.452
4 iron, 4 sulfur cluster binding Hamap molecular function 49.452

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