Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

NHLRC2; TRIM3; TRIM71

Species

P.mammillata

Unique Gene ID

Phmamm.g00014806

Gene Model ID

Phmamm.CG.MTP2014.S1442.g14806

Location

S1442:30245..34419

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1442.g14806.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

3 results

AHC0AAA147YL17

Plate: Plate_147_L17

AHC0AAA147YN19

Plate: Plate_147_N19

AHC0AAA160YN23

Plate: Plate_160_N23

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
6-blade_b-propeller_TolB-like Gene3D Six-bladed beta-propeller, TolB-like

GOSlim

22 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
ubiquitin-protein transferase activity Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
intracellular Blast cellular component
cytoplasm Blast cellular component
endosome Blast cellular component
early endosome Blast cellular component
Golgi apparatus Blast cellular component
protein C-terminus binding Blast molecular function
zinc ion binding Blast molecular function
transferase activity Blast molecular function
cell projection Blast cellular component
metal ion binding Blast molecular function
cytoplasmic part Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
macromolecular complex Blast cellular component
negative regulation of gene expression Blast biological process
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 42.4 5.24e-04
RNA binding Hs molecular function 42.4 5.24e-04
ubiquitin-protein transferase activity Hs molecular function 43.1 3.01e-04
protein binding Hs molecular function 102 3.29e-23
extracellular region Hs cellular component 102 3.29e-23
intracellular Hs cellular component 43.1 3.01e-04
cytoplasm Hs cellular component 43.1 3.01e-04
endosome Hs cellular component 43.1 3.01e-04
early endosome Hs cellular component 43.1 3.01e-04
Golgi apparatus Hs cellular component 43.1 3.01e-04
protein C-terminus binding Hs molecular function 43.1 3.01e-04
zinc ion binding Hs molecular function 43.1 3.01e-04
transferase activity Hs molecular function 42.4 5.24e-04
translation repressor activity Hs molecular function 42.4 5.24e-04
dendrite Hs cellular component 43.1 3.01e-04
platelet alpha granule lumen Hs cellular component 102 3.29e-23
miRNA binding Hs molecular function 42.4 5.24e-04
cell projection Hs cellular component 43.1 3.01e-04
metal ion binding Hs molecular function 43.1 3.01e-04
ubiquitin protein ligase activity Hs molecular function 43.1 3.01e-04

GO (InterProScan)

No result

GO Term Analysis Type e-value