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GENE CARD

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  1. Gene 'Cisavi.CG.ENS81.R125...'

Gene Card

Best human hits

DCP2; NUDT5

Species

P.mammillata

Unique Gene ID

Phmamm.g00014753

Gene Model ID

Phmamm.CG.MTP2014.S1420.g14753

Location

S1420:12527..14861

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1420.g14753.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

29 results

AHC0AAA21YA18

Plate: Plate_21_A18

AHC0AAA39YM22

Plate: Plate_39_M22

AHC0AAA45YM12

Plate: Plate_45_M12

AHC0AAA61YM21

Plate: Plate_61_M21

AHC0AAA79YM01

Plate: Plate_79_M01

AHC0AAA100YP06

Plate: Plate_100_P06

AHC0AAA101YC08

Plate: Plate_101_C08

AHC0AAA103YI24

Plate: Plate_103_I24

AHC0AAA117YN11

Plate: Plate_117_N11

AHC0AAA129YP16

Plate: Plate_129_P16

AHC0AAA136YN14

Plate: Plate_136_N14

AHC0AAA139YF19

Plate: Plate_139_F19

AHC0AAA145YE23

Plate: Plate_145_E23

AHC0AAA146YP22

Plate: Plate_146_P22

AHC0AAA155YA24

Plate: Plate_155_A24

AHC0AAA155YB12

Plate: Plate_155_B12

AHC0AAA156YP13

Plate: Plate_156_P13

AHC0AAA158YJ20

Plate: Plate_158_J20

AHC0AAA159YD07

Plate: Plate_159_D07

AHC0AAA180YJ08

Plate: Plate_180_J08

AHC0AAA190YG16

Plate: Plate_190_G16

AHC0AAA191YK10

Plate: Plate_191_K10

AHC0AAA200YP23

Plate: Plate_200_P23

AHC0AAA209YC16

Plate: Plate_209_C16

AHC0AAA209YM05

Plate: Plate_209_M05

AHC0AAA214YB01

Plate: Plate_214_B01

AHC0AAA221YJ10

Plate: Plate_221_J10

AHC0AAA250YJ15

Plate: Plate_250_J15

AHC0AAA39YO24

Plate: Plate_39_O24

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
NUDIX_hydrolase-like_dom_sf SUPERFAMILY NUDIX hydrolase-like domain superfamily
DCP2_BoxA_sf Gene3D mRNA decapping protein 2, Box A domain superfamily
NUDIX_hydrolase_CS ProSitePatterns NUDIX hydrolase, conserved site
DCP2_BoxA_sf SUPERFAMILY mRNA decapping protein 2, Box A domain superfamily
DCP2_BoxA Pfam mRNA decapping protein 2, Box A domain
DCP2_BoxA SMART mRNA decapping protein 2, Box A domain
NUDIX_hydrolase_dom Pfam NUDIX hydrolase domain
NUDIX_hydrolase_dom ProSiteProfiles NUDIX hydrolase domain

GOSlim

26 results

GO Term Annotation Origin Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Orthology biological process
magnesium ion binding Blast molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
intracellular Blast cellular component
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
mRNA catabolic process Orthology biological process
transferase activity Blast molecular function
hydrolase activity Orthology molecular function
cell junction Orthology cellular component
protein homodimerization activity Blast molecular function
metal ion binding Orthology molecular function
extracellular exosome Blast cellular component
nuclear-transcribed mRNA catabolic process Orthology biological process
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
RNA metabolic process Orthology biological process
transition metal ion binding Orthology molecular function
organelle organization Orthology biological process
DNA metabolic process Orthology biological process
transferase activity, transferring phosphorus-containing groups Orthology molecular function
pyrophosphatase activity Orthology molecular function

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
deadenylation-dependent decapping of nuclear-transcribed mRNA Hs biological process
P-body Hs cellular component
RNA binding Hs molecular function
5'-3' exoribonuclease activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
mRNA catabolic process Hs biological process
RISC complex Hs cellular component
hydrolase activity Hs molecular function
exoribonuclease activity, producing 5'-phosphomonoesters Hs molecular function
cell junction Hs cellular component
manganese ion binding Hs molecular function
negative regulation of telomere maintenance via telomerase Hs biological process
cytoplasmic ribonucleoprotein granule Hs cellular component
regulation of mRNA stability Hs biological process
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay Hs biological process
metal ion binding Hs molecular function
m7G(5')pppN diphosphatase activity Hs molecular function
telomerase RNA binding Hs molecular function
RNA phosphodiester bond hydrolysis, exonucleolytic Hs biological process

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
magnesium ion binding Hs molecular function 39.3 0.002
P-body Hs cellular component 259 1.73e-83
RNA binding Hs molecular function 259 1.73e-83
5'-3' exoribonuclease activity Hs molecular function 259 1.73e-83
protein binding Hs molecular function 259 1.73e-83
intracellular Hs cellular component 39.3 0.002
nucleus Hs cellular component 259 1.73e-83
nucleoplasm Hs cellular component 259 1.73e-83
cytoplasm Hs cellular component 259 1.73e-83
cytosol Hs cellular component 259 1.73e-83
RISC complex Hs cellular component 259 1.73e-83
transferase activity Hs molecular function 39.3 0.002
nucleotidyltransferase activity Hs molecular function 39.3 0.002
hydrolase activity Hs molecular function 259 1.73e-83
exoribonuclease activity, producing 5'-phosphomonoesters Hs molecular function 259 1.73e-83
nucleoside-diphosphatase activity Hs molecular function 39.3 0.002
ADP-sugar diphosphatase activity Hs molecular function 39.3 0.002
cell junction Hs cellular component 259 1.73e-83
manganese ion binding Hs molecular function 259 1.73e-83
snoRNA binding Hs molecular function 39.3 0.002
cytoplasmic ribonucleoprotein granule Hs cellular component 259 1.73e-83
protein homodimerization activity Hs molecular function 39.3 0.002
8-oxo-dGDP phosphatase activity Hs molecular function 39.3 0.002
metal ion binding Hs molecular function 259 1.73e-83
ADP-ribose diphosphatase activity Hs molecular function 39.3 0.002
m7G(5')pppN diphosphatase activity Hs molecular function 259 1.73e-83
telomerase RNA binding Hs molecular function 259 1.73e-83
extracellular exosome Hs cellular component 39.3 0.002

GO (InterProScan)

3 results

GO Term Analysis Type e-value
RNA binding Gene3D molecular function 3.4E-79
hydrolase activity Gene3D molecular function 3.4E-79
manganese ion binding Gene3D molecular function 3.4E-79