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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

MALRD1; MDGA1; MDGA2

Species

P.mammillata

Unique Gene ID

Phmamm.g00014237

Gene Model ID

Phmamm.CG.MTP2014.S1247.g14237

Location

S1247:29343..33787

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1247.g14237.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

29 results

AHC0AAA18YF09

Plate: Plate_18_F09

AHC0AAA23YN01

Plate: Plate_23_N01

AHC0AAA5YB06

Plate: Plate_5_B06

AHC0AAA29YL21

Plate: Plate_29_L21

AHC0AAA30YB02

Plate: Plate_30_B02

AHC0AAA33YP18

Plate: Plate_33_P18

AHC0AAA54YN22

Plate: Plate_54_N22

AHC0AAA54YP11

Plate: Plate_54_P11

AHC0AAA60YD16

Plate: Plate_60_D16

AHC0AAA68YO03

Plate: Plate_68_O03

AHC0AAA80YH22

Plate: Plate_80_H22

AHC0AAA118YP01

Plate: Plate_118_P01

AHC0AAA143YC23

Plate: Plate_143_C23

AHC0AAA89YN05

Plate: Plate_89_N05

AHC0AAA94YC23

Plate: Plate_94_C23

AHC0AAA98YF04

Plate: Plate_98_F04

AHC0AAA160YE19

Plate: Plate_160_E19

AHC0AAA165YN01

Plate: Plate_165_N01

AHC0AAA167YM08

Plate: Plate_167_M08

AHC0AAA182YF11

Plate: Plate_182_F11

AHC0AAA194YF05

Plate: Plate_194_F05

AHC0AAA207YB18

Plate: Plate_207_B18

AHC0AAA212YC07

Plate: Plate_212_C07

AHC0AAA227YL21

Plate: Plate_227_L21

AHC0AAA256YM17

Plate: Plate_256_M17

AHC0AAA261YL21

Plate: Plate_261_L21

AHC0AAA54YP09

Plate: Plate_54_P09

AHC0AAA54YP24

Plate: Plate_54_P24

AHC0AAA98YF02

Plate: Plate_98_F02

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

18 results

IPR Term Analysis Definition
LDrepeatLR_classA_rpt CDD Low-density lipoprotein (LDL) receptor class A repeat
CUB_dom CDD CUB domain
LDL_receptor-like_sf SUPERFAMILY LDL receptor-like superfamily
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
CUB_dom Pfam CUB domain
LDrepeatLR_classA_rpt ProSiteProfiles Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt Pfam Low-density lipoprotein (LDL) receptor class A repeat
MAM_dom Pfam MAM domain
MAM_dom CDD MAM domain
Sperma_CUB_dom_sf Gene3D Spermadhesin, CUB domain superfamily
LDLR_class-A_CS ProSitePatterns Low-density lipoprotein (LDL) receptor class A, conserved site
CUB_dom ProSiteProfiles CUB domain
LDrepeatLR_classA_rpt PRINTS Low-density lipoprotein (LDL) receptor class A repeat
MAM_dom SMART MAM domain
LDrepeatLR_classA_rpt SMART Low-density lipoprotein (LDL) receptor class A repeat
MAM_dom ProSiteProfiles MAM domain
Sperma_CUB_dom_sf SUPERFAMILY Spermadhesin, CUB domain superfamily
CUB_dom SMART CUB domain

GOSlim

13 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
intracellular organelle part Blast cellular component
organelle membrane Blast cellular component
intrinsic component of membrane Blast cellular component
intrinsic component of plasma membrane Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 122 2.50e-28
extracellular region Hs cellular component 112 2.07e-25
extracellular space Hs cellular component 110 5.69e-25
cytoplasm Hs cellular component 122 2.50e-28
Golgi apparatus Hs cellular component 122 2.50e-28
plasma membrane Hs cellular component 112 2.07e-25
membrane Hs cellular component 122 2.50e-28
integral component of membrane Hs cellular component 122 2.50e-28
cytoplasmic vesicle membrane Hs cellular component 122 2.50e-28
anchored component of membrane Hs cellular component 112 2.07e-25
cytoplasmic vesicle Hs cellular component 122 2.50e-28
anchored component of plasma membrane Hs cellular component 110 5.69e-25

GO (InterProScan)

2 results

GO Term Analysis Type e-value
protein binding CDD molecular function 2.75052E-11
membrane CDD cellular component 6.04648E-46