Gene Card
Best human hits
CRNKL1; PABPN1L; SART3
Species
Unique Gene ID
Phmamm.g00014144
Gene Model ID
Phmamm.CG.MTP2014.S1223.g14144
Location
S1223:12910..22944
Transcript Models and Sequences
AHC0AAA14YK12
Plate: Plate_14_K12
AHC0AAA17YI04
Plate: Plate_17_I04
AHC0AAA23YG17
Plate: Plate_23_G17
AHC0AAA30YO17
Plate: Plate_30_O17
AHC0AAA54YM19
Plate: Plate_54_M19
AHC0AAA106YK03
Plate: Plate_106_K03
AHC0AAA115YJ17
Plate: Plate_115_J17
AHC0AAA120YP06
Plate: Plate_120_P06
AHC0AAA124YJ04
Plate: Plate_124_J04
AHC0AAA137YD01
Plate: Plate_137_D01
AHC0AAA138YJ24
Plate: Plate_138_J24
AHC0AAA143YL04
Plate: Plate_143_L04
AHC0AAA85YO08
Plate: Plate_85_O08
AHC0AAA98YN10
Plate: Plate_98_N10
AHC0AAA120YB04
Plate: Plate_120_B04
AHC0AAA166YL06
Plate: Plate_166_L06
AHC0AAA175YJ05
Plate: Plate_175_J05
AHC0AAA179YP22
Plate: Plate_179_P22
AHC0AAA183YO07
Plate: Plate_183_O07
AHC0AAA207YO07
Plate: Plate_207_O07
AHC0AAA261YC01
Plate: Plate_261_C01
AHC0AAA261YG16
Plate: Plate_261_G16
AHC0AAA54YM17
Plate: Plate_54_M17
AHC0AAA98YP12
Plate: Plate_98_P12
n/a
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

IPR Term | Analysis | Definition |
---|---|---|
RRM_dom | ProSiteProfiles | RNA recognition motif domain |
TPR-like_helical_dom_sf | SUPERFAMILY | Tetratricopeptide-like helical domain superfamily |
TPR-like_helical_dom_sf | Gene3D | Tetratricopeptide-like helical domain superfamily |
RRM_dom | Pfam | RNA recognition motif domain |
RRM_dom | SMART | RNA recognition motif domain |
Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
HAT | SMART | HAT (Half-A-TPR) repeat |
SART3_RRM1 | CDD | SART3, RNA recognition motif 1 |
GO Term | Annotation Origin | Type |
---|---|---|
mRNA splicing, via spliceosome | Orthology | biological process |
cell morphogenesis | Orthology | biological process |
nucleic acid binding | Orthology | molecular function |
RNA binding | Orthology | molecular function |
protein binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleoplasm | Orthology | cellular component |
cytoplasm | Orthology | cellular component |
RNA processing | Orthology | biological process |
mRNA processing | Orthology | biological process |
RNA splicing | Orthology | biological process |
regulation of gene expression | Orthology | biological process |
nuclear speck | Orthology | cellular component |
nuclear part | Orthology | cellular component |
macromolecular complex | Orthology | cellular component |
organelle organization | Orthology | biological process |
DNA binding | Orthology | molecular function |
nuclear body | Orthology | cellular component |
cell proliferation | Orthology | biological process |
animal organ development | Orthology | biological process |
immune system process | Orthology | biological process |
cell division | Orthology | biological process |
peptidase activity, acting on L-amino acid peptides | Orthology | molecular function |
enzyme binding | Orthology | molecular function |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
spliceosomal tri-snRNP complex assembly | Hs | biological process |
spliceosomal snRNP assembly | Hs | biological process |
mRNA splicing, via spliceosome | Hs | biological process |
cell morphogenesis | Hs | biological process |
nucleic acid binding | Hs | molecular function |
RNA binding | Hs | molecular function |
protein binding | Hs | molecular function |
nucleus | Hs | cellular component |
nucleoplasm | Hs | cellular component |
U6atac snRNP | Hs | cellular component |
cytoplasm | Hs | cellular component |
nucleosome assembly | Hs | biological process |
RNA processing | Hs | biological process |
mRNA processing | Hs | biological process |
RNA splicing | Hs | biological process |
regulation of gene expression | Hs | biological process |
Cajal body | Hs | cellular component |
nuclear speck | Hs | cellular component |
U6 snRNA binding | Hs | molecular function |
U4 snRNA binding | Hs | molecular function |
U6atac snRNA binding | Hs | molecular function |
histone binding | Hs | molecular function |
U4/U6 snRNP | Hs | cellular component |
hematopoietic stem cell proliferation | Hs | biological process |
positive regulation of histone deubiquitination | Hs | biological process |
ubiquitin-specific protease binding | Hs | molecular function |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
Prp19 complex | Hs | cellular component | 54.3 | 2.51e-07 |
nucleic acid binding | Hs | molecular function | 493 | 5.30e-161 |
RNA binding | Hs | molecular function | 493 | 5.30e-161 |
protein binding | Hs | molecular function | 493 | 5.30e-161 |
nucleus | Hs | cellular component | 493 | 5.30e-161 |
nucleoplasm | Hs | cellular component | 493 | 5.30e-161 |
spliceosomal complex | Hs | cellular component | 54.3 | 2.51e-07 |
U6atac snRNP | Hs | cellular component | 493 | 5.30e-161 |
cytoplasm | Hs | cellular component | 493 | 5.30e-161 |
Cajal body | Hs | cellular component | 493 | 5.30e-161 |
nuclear speck | Hs | cellular component | 493 | 5.30e-161 |
U6 snRNA binding | Hs | molecular function | 493 | 5.30e-161 |
U4 snRNA binding | Hs | molecular function | 493 | 5.30e-161 |
U6atac snRNA binding | Hs | molecular function | 493 | 5.30e-161 |
histone binding | Hs | molecular function | 493 | 5.30e-161 |
U4/U6 snRNP | Hs | cellular component | 493 | 5.30e-161 |
U2-type catalytic step 2 spliceosome | Hs | cellular component | 54.3 | 2.51e-07 |
prespliceosome | Hs | cellular component | 54.3 | 2.51e-07 |
precatalytic spliceosome | Hs | cellular component | 54.3 | 2.51e-07 |
catalytic step 1 spliceosome | Hs | cellular component | 54.3 | 2.51e-07 |
catalytic step 2 spliceosome | Hs | cellular component | 54.3 | 2.51e-07 |
post-mRNA release spliceosomal complex | Hs | cellular component | 54.3 | 2.51e-07 |
ubiquitin-specific protease binding | Hs | molecular function | 493 | 5.30e-161 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleic acid binding | SUPERFAMILY | molecular function | 2.17E-18 |
protein binding | SUPERFAMILY | molecular function | 2.05E-52 |
RNA processing | SMART | biological process | 0.086 |