Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

93 results

AHC0AAA54YL01

Plate: Plate_54_L01

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

No result

IPR Term	Analysis	Definition

GOSlim

15 results

GO Term	Annotation Origin	Type
RNA binding	Orthology	molecular function
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
ribosome	Orthology	cellular component
protein transport	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
protein binding	Orthology	molecular function
endoplasmic reticulum lumen	Orthology	cellular component
integral component of plasma membrane	Orthology	cellular component
microtubule-based movement	Orthology	biological process
cell differentiation	Orthology	biological process
cytoskeletal protein binding	Orthology	molecular function
cellular protein modification process	Orthology	biological process
cell adhesion molecule binding	Orthology	molecular function

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
osteoblast differentiation	Hs	biological process
RNA binding	Hs	molecular function
receptor activity	Hs	molecular function
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
ribosome	Hs	cellular component
translation	Hs	biological process
protein transport	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
integral component of endoplasmic reticulum membrane	Hs	cellular component
protein binding	Hs	molecular function
endoplasmic reticulum lumen	Hs	cellular component
integral component of plasma membrane	Hs	cellular component
microtubule-based movement	Hs	biological process
kinesin binding	Hs	molecular function
post-translational protein modification	Hs	biological process
cadherin binding	Hs	molecular function

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	48.9	1.43e-05
receptor activity	Hs	molecular function	48.9	1.43e-05
endoplasmic reticulum	Hs	cellular component	48.9	1.43e-05
endoplasmic reticulum membrane	Hs	cellular component	48.9	1.43e-05
ribosome	Hs	cellular component	48.9	1.43e-05
membrane	Hs	cellular component	48.9	1.43e-05
integral component of membrane	Hs	cellular component	48.9	1.43e-05
integral component of endoplasmic reticulum membrane	Hs	cellular component	48.9	1.43e-05

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
integral component of endoplasmic reticulum membrane	PANTHER	cellular component	7.2E-37

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences

External database links

Genoscope Yasuo Villefranche

Regulatory Regions

InterPro

GOSlim

GO (Orthology)

GO (Blast)

GO (InterProScan)