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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

YTHDF1; YTHDF2; YTHDF3

Species

P.mammillata

Unique Gene ID

Phmamm.g00014090

Gene Model ID

Phmamm.CG.MTP2014.S1209.g14090

Location

S1209:22639..28514

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

11 results

AHC0AAA37YB01

Plate: Plate_37_B01

AHC0AAA47YN05

Plate: Plate_47_N05

AHC0AAA48YP05

Plate: Plate_48_P05

AHC0AAA55YC19

Plate: Plate_55_C19

AHC0AAA100YD18

Plate: Plate_100_D18

AHC0AAA130YK15

Plate: Plate_130_K15

AHC0AAA148YJ23

Plate: Plate_148_J23

AHC0AAA83YP07

Plate: Plate_83_P07

AHC0AAA237YE15

Plate: Plate_237_E15

AHC0AAA262YF17

Plate: Plate_262_F17

AHC0AAA55YC17

Plate: Plate_55_C17

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
YTH_domain ProSiteProfiles YTH domain
YTH_domain Pfam YTH domain

GOSlim

23 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
microtubule organizing center Orthology cellular component
cytosol Orthology cellular component
cell differentiation Orthology biological process
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
cell development Orthology biological process
gamete generation Orthology biological process
immune response Orthology biological process
macromolecular complex binding Orthology molecular function
mRNA catabolic process Orthology biological process
positive regulation of gene expression Orthology biological process
negative regulation of signal transduction Orthology biological process
Notch signaling pathway Orthology biological process
translational initiation Orthology biological process
anatomical structure morphogenesis Orthology biological process
multicellular organism development Orthology biological process
immune system process Orthology biological process
animal organ development Orthology biological process

GO (Orthology)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
P-body Hs cellular component
oocyte maturation Hs biological process
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
microtubule organizing center Hs cellular component
cytosol Hs cellular component
humoral immune response Hs biological process
cell differentiation Hs biological process
cytoplasmic ribonucleoprotein granule Hs cellular component
ribosome binding Hs molecular function
regulation of mRNA stability Hs biological process
positive regulation of translation Hs biological process
negative regulation of Notch signaling pathway Hs biological process
positive regulation of translational initiation Hs biological process
oogenesis Hs biological process
embryonic morphogenesis Hs biological process
mRNA destabilization Hs biological process
regulation of hematopoietic stem cell differentiation Hs biological process
regulation of meiotic cell cycle process involved in oocyte maturation Hs biological process
positive regulation of cap-independent translational initiation Hs biological process
N6-methyladenosine-containing RNA binding Hs molecular function

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 431 9.45e-145
RNA binding Hs molecular function 431 9.45e-145
protein binding Hs molecular function 431 9.45e-145
nucleus Hs cellular component 431 9.45e-145
cytoplasm Hs cellular component 431 9.45e-145
microtubule organizing center Hs cellular component 431 9.45e-145
cytosol Hs cellular component 431 9.45e-145
cytoplasmic ribonucleoprotein granule Hs cellular component 431 9.45e-145
ribosome binding Hs molecular function 413 4.82e-138
N6-methyladenosine-containing RNA binding Hs molecular function 431 9.45e-145

GO (InterProScan)

1 result

GO Term Analysis Type e-value
RNA binding Pfam molecular function 9.4E-42