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GENE CARD

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Gene Card

Species

P.mammillata

Unique Gene ID

Phmamm.g00013817

Gene Model ID

Phmamm.CG.MTP2014.S1134.g13817

Location

S1134:42838..44094

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1134.g13817.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

40 results

AHC0AAA16YD12

Plate: Plate_16_D12

AHC0AAA25YO06

Plate: Plate_25_O06

AHC0AAA6YO15

Plate: Plate_6_O15

AHC0AAA39YL19

Plate: Plate_39_L19

AHC0AAA43YI07

Plate: Plate_43_I07

AHC0AAA52YO02

Plate: Plate_52_O02

AHC0AAA54YA02

Plate: Plate_54_A02

AHC0AAA61YA06

Plate: Plate_61_A06

AHC0AAA65YG04

Plate: Plate_65_G04

AHC0AAA79YN01

Plate: Plate_79_N01

AHC0AAA79YO02

Plate: Plate_79_O02

AHC0AAA106YH01

Plate: Plate_106_H01

AHC0AAA116YP07

Plate: Plate_116_P07

AHC0AAA119YP08

Plate: Plate_119_P08

AHC0AAA121YD04

Plate: Plate_121_D04

AHC0AAA126YA02

Plate: Plate_126_A02

AHC0AAA130YH24

Plate: Plate_130_H24

AHC0AAA133YA12

Plate: Plate_133_A12

AHC0AAA147YC06

Plate: Plate_147_C06

AHC0AAA150YC07

Plate: Plate_150_C07

AHC0AAA150YI10

Plate: Plate_150_I10

AHC0AAA153YM19

Plate: Plate_153_M19

AHC0AAA153YO20

Plate: Plate_153_O20

AHC0AAA87YJ20

Plate: Plate_87_J20

AHC0AAA90YL09

Plate: Plate_90_L09

AHC0AAA106YJ03

Plate: Plate_106_J03

AHC0AAA133YA10

Plate: Plate_133_A10

AHC0AAA147YE08

Plate: Plate_147_E08

AHC0AAA185YO20

Plate: Plate_185_O20

AHC0AAA190YG03

Plate: Plate_190_G03

AHC0AAA193YH23

Plate: Plate_193_H23

AHC0AAA198YH18

Plate: Plate_198_H18

AHC0AAA217YH07

Plate: Plate_217_H07

AHC0AAA226YB05

Plate: Plate_226_B05

AHC0AAA226YD16

Plate: Plate_226_D16

AHC0AAA232YO03

Plate: Plate_232_O03

AHC0AAA241YF19

Plate: Plate_241_F19

AHC0AAA268YO21

Plate: Plate_268_O21

AHC0AAA39YL17

Plate: Plate_39_L17

AHC0AAA54YC04

Plate: Plate_54_C04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term Analysis Definition
PMF1/NNF1 PANTHER Polyamine-modulated factor 1/Kinetochore protein NNF1

GOSlim

19 results

GO Term Annotation Origin Type
transcription coactivator activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
cell cycle Orthology biological process
intracellular membrane-bounded organelle Orthology cellular component
cell division Orthology biological process
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
intracellular part Orthology cellular component
cellular process Orthology biological process
organelle organization Orthology biological process
nuclear lumen InterProScan cellular component

GO (Orthology)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
MIS12/MIND type complex Hs cellular component
chromosome, centromeric region Hs cellular component
kinetochore Hs cellular component
condensed chromosome kinetochore Hs cellular component
transcription coactivator activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
chromosome Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
cell cycle Hs biological process
chromosome segregation Hs biological process
sister chromatid cohesion Hs biological process
intracellular membrane-bounded organelle Hs cellular component
leucine zipper domain binding Hs molecular function
cell division Hs biological process

GO (Blast)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nuclear MIS12/MIND complex PANTHER cellular component 1.1E-29