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GENE CARD

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Gene Card

Best human hits

ASH1L; NSD1; SETD2

Species

P.mammillata

Unique Gene ID

Phmamm.g00013767

Gene Model ID

Phmamm.CG.MTP2014.S1122.g13767

Location

S1122:400..19436

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

17 results

AHC0AAA13YB01

Plate: Plate_13_B01

AHC0AAA16YB22

Plate: Plate_16_B22

AHC0AAA50YI15

Plate: Plate_50_I15

AHC0AAA54YM17

Plate: Plate_54_M17

AHC0AAA61YA15

Plate: Plate_61_A15

AHC0AAA77YG19

Plate: Plate_77_G19

AHC0AAA109YH06

Plate: Plate_109_H06

AHC0AAA138YB04

Plate: Plate_138_B04

AHC0AAA154YP09

Plate: Plate_154_P09

AHC0AAA87YK11

Plate: Plate_87_K11

AHC0AAA179YK11

Plate: Plate_179_K11

AHC0AAA212YK17

Plate: Plate_212_K17

AHC0AAA220YK16

Plate: Plate_220_K16

AHC0AAA224YH22

Plate: Plate_224_H22

AHC0AAA230YD06

Plate: Plate_230_D06

AHC0AAA258YJ14

Plate: Plate_258_J14

AHC0AAA54YO19

Plate: Plate_54_O19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
Post-SET_dom SMART Post-SET domain
Post-SET_dom ProSiteProfiles Post-SET domain
AWS_dom ProSiteProfiles AWS domain
SET_dom ProSiteProfiles SET domain
SET_dom SMART SET domain
AWS_dom SMART AWS domain
SET_dom Pfam SET domain
WW_dom SMART WW domain
SRI_sf Gene3D Set2 Rpb1 interacting domain superfamily
WW_dom ProSitePatterns WW domain
SRI Pfam Set2 Rpb1 interacting domain
WW_dom_sf SUPERFAMILY WW domain superfamily
WW_dom ProSiteProfiles WW domain
WW_dom CDD WW domain
WW_dom Pfam WW domain

GOSlim

46 results

GO Term Annotation Origin Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
angiogenesis Orthology biological process
immune system process Orthology biological process
DNA binding Blast molecular function
chromatin binding Blast molecular function
transcription cofactor activity Blast molecular function
transcription corepressor activity Blast molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
Golgi apparatus Blast cellular component
DNA repair Orthology biological process
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
multicellular organism development Orthology biological process
zinc ion binding Blast molecular function
regulation of gene expression Orthology biological process
transferase activity Orthology molecular function
cell junction Blast cellular component
cell differentiation Orthology biological process
innate immune response Orthology biological process
metal ion binding Orthology molecular function
extracellular exosome Blast cellular component
blood vessel morphogenesis Orthology biological process
anatomical structure morphogenesis Orthology biological process
anatomical structure formation involved in morphogenesis Orthology biological process
nervous system development Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
organelle organization Orthology biological process
metabolic process Orthology biological process
cellular protein modification process Orthology biological process
intracellular protein transport Orthology biological process
brain development Orthology biological process
membrane organization Orthology biological process
cell division Orthology biological process
tubulin binding Orthology molecular function
animal organ development Orthology biological process
cell development Orthology biological process
defense response Orthology biological process
microtubule-based process Orthology biological process
protein localization to organelle Orthology biological process
receptor binding Blast molecular function
transcription factor binding Blast molecular function

GO (Orthology)

47 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
angiogenesis Hs biological process
vasculogenesis Hs biological process
morphogenesis of a branching structure Hs biological process
neural tube closure Hs biological process
immune system process Hs biological process
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromosome Hs cellular component
DNA repair Hs biological process
mismatch repair Hs biological process
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription elongation from RNA polymerase II promoter Hs biological process
cellular response to DNA damage stimulus Hs biological process
multicellular organism development Hs biological process
methyltransferase activity Hs molecular function
histone H3-K36 methylation Hs biological process
regulation of gene expression Hs biological process
regulation of double-strand break repair via homologous recombination Hs biological process
regulation of mRNA export from nucleus Hs biological process
protein-lysine N-methyltransferase activity Hs molecular function
transferase activity Hs molecular function
peptidyl-lysine trimethylation Hs biological process
histone-lysine N-methyltransferase activity Hs molecular function
peptidyl-lysine monomethylation Hs biological process
cell differentiation Hs biological process
forebrain development Hs biological process
methylation Hs biological process
regulation of cytokinesis Hs biological process
nucleosome organization Hs biological process
histone lysine methylation Hs biological process
endodermal cell differentiation Hs biological process
alpha-tubulin binding Hs molecular function
innate immune response Hs biological process
metal ion binding Hs molecular function
histone methyltransferase activity (H3-K36 specific) Hs molecular function
mesoderm morphogenesis Hs biological process
embryonic organ development Hs biological process
embryonic cranial skeleton morphogenesis Hs biological process
stem cell differentiation Hs biological process
stem cell development Hs biological process
defense response to virus Hs biological process
histone H3-K36 dimethylation Hs biological process
microtubule cytoskeleton organization involved in mitosis Hs biological process
regulation of protein localization to chromatin Hs biological process

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 183 3.66e-46
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 187 1.96e-47
DNA binding Hs molecular function 187 1.96e-47
chromatin binding Hs molecular function 187 1.96e-47
transcription cofactor activity Hs molecular function 183 3.66e-46
transcription corepressor activity Hs molecular function 183 3.66e-46
protein binding Hs molecular function 399 1.78e-113
nucleus Hs cellular component 399 1.78e-113
nucleoplasm Hs cellular component 399 1.78e-113
chromosome Hs cellular component 399 1.78e-113
Golgi apparatus Hs cellular component 187 1.96e-47
bicellular tight junction Hs cellular component 187 1.96e-47
methyltransferase activity Hs molecular function 399 1.78e-113
zinc ion binding Hs molecular function 183 3.66e-46
protein-lysine N-methyltransferase activity Hs molecular function 399 1.78e-113
transferase activity Hs molecular function 399 1.78e-113
histone-lysine N-methyltransferase activity Hs molecular function 399 1.78e-113
cell junction Hs cellular component 187 1.96e-47
estrogen receptor binding Hs molecular function 183 3.66e-46
histone methyltransferase activity (H4-K20 specific) Hs molecular function 183 3.66e-46
histone methyltransferase activity (H3-K4 specific) Hs molecular function 187 1.96e-47
retinoic acid receptor binding Hs molecular function 183 3.66e-46
alpha-tubulin binding Hs molecular function 399 1.78e-113
metal ion binding Hs molecular function 399 1.78e-113
retinoid X receptor binding Hs molecular function 183 3.66e-46
thyroid hormone receptor binding Hs molecular function 183 3.66e-46
histone methyltransferase activity (H3-K36 specific) Hs molecular function 399 1.78e-113
androgen receptor binding Hs molecular function 183 3.66e-46
extracellular exosome Hs cellular component 187 1.96e-47

GO (InterProScan)

6 results

GO Term Analysis Type e-value
protein binding SMART molecular function 1.5E-43
nucleus SMART cellular component 1.2E-17
chromosome Pfam cellular component 2.3E-23
regulation of transcription, DNA-templated Pfam biological process 2.3E-23
histone-lysine N-methyltransferase activity SMART molecular function 1.2E-17
histone lysine methylation Pfam biological process 2.3E-23