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GENE CARD

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  1. Gene 'KH2012:KH.S2345.1'
  2. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

HNRNPL; HNRNPLL

Species

P.mammillata

Unique Gene ID

Phmamm.g00013754

Gene Model ID

Phmamm.CG.MTP2014.S1119.g13754

Location

S1119:8970..18977

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

25 results

AHC0AAA5YD06

Plate: Plate_5_D06

AHC0AAA9YB16

Plate: Plate_9_B16

AHC0AAA50YM09

Plate: Plate_50_M09

AHC0AAA59YA11

Plate: Plate_59_A11

AHC0AAA63YN16

Plate: Plate_63_N16

AHC0AAA71YF12

Plate: Plate_71_F12

AHC0AAA72YI09

Plate: Plate_72_I09

AHC0AAA105YK04

Plate: Plate_105_K04

AHC0AAA115YK05

Plate: Plate_115_K05

AHC0AAA115YO08

Plate: Plate_115_O08

AHC0AAA117YE09

Plate: Plate_117_E09

AHC0AAA129YP01

Plate: Plate_129_P01

AHC0AAA132YA02

Plate: Plate_132_A02

AHC0AAA154YD01

Plate: Plate_154_D01

AHC0AAA154YG09

Plate: Plate_154_G09

AHC0AAA88YG10

Plate: Plate_88_G10

AHC0AAA96YB16

Plate: Plate_96_B16

AHC0AAA193YB03

Plate: Plate_193_B03

AHC0AAA196YE23

Plate: Plate_196_E23

AHC0AAA200YH10

Plate: Plate_200_H10

AHC0AAA209YI19

Plate: Plate_209_I19

AHC0AAA215YF05

Plate: Plate_215_F05

AHC0AAA241YA23

Plate: Plate_241_A23

AHC0AAA243YO12

Plate: Plate_243_O12

AHC0AAA269YO08

Plate: Plate_269_O08

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
RRM_dom ProSiteProfiles RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf Gene3D Nucleotide-binding alpha-beta plait domain superfamily
DUF3355 Pfam Domain of unknown function DUF3355
HnRNP-L/PTB TIGRFAM HnRNP-L/PTB
RBD_domain_sf SUPERFAMILY RNA-binding domain superfamily
RRM_dom SMART RNA recognition motif domain

GOSlim

26 results

GO Term Annotation Origin Type
mRNA splicing, via spliceosome Orthology biological process
nucleic acid binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
RNA processing Orthology biological process
mRNA processing Orthology biological process
membrane Orthology cellular component
RNA metabolic process Orthology biological process
transcription regulatory region DNA binding Orthology molecular function
perinuclear region of cytoplasm Orthology cellular component
extracellular exosome Orthology cellular component
catalytic activity Orthology molecular function
metabolic process Orthology biological process
regulation of gene expression Orthology biological process
RNA splicing Orthology biological process
positive regulation of gene expression Orthology biological process
cell communication Orthology biological process
cellular response to stress Orthology biological process
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component
negative regulation of gene expression Orthology biological process
response to organic substance Orthology biological process

GO (Orthology)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
regulation of alternative mRNA splicing, via spliceosome Hs biological process
mRNA splicing, via spliceosome Hs biological process
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
mRNA binding Hs molecular function
mRNA 3'-UTR binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
RNA processing Hs biological process
mRNA processing Hs biological process
circadian rhythm Hs biological process
membrane Hs cellular component
RNA metabolic process Hs biological process
intracellular ribonucleoprotein complex Hs cellular component
positive regulation of RNA splicing Hs biological process
cellular response to amino acid starvation Hs biological process
ribonucleoprotein granule Hs cellular component
transcription regulatory region DNA binding Hs molecular function
pronucleus Hs cellular component
positive regulation of translation Hs biological process
negative regulation of mRNA splicing, via spliceosome Hs biological process
perinuclear region of cytoplasm Hs cellular component
extracellular exosome Hs cellular component
pre-mRNA intronic binding Hs molecular function
response to peptide Hs biological process
mRNA CDS binding Hs molecular function
catalytic activity Hs molecular function
metabolic process Hs biological process

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 379 1.07e-126
RNA binding Hs molecular function 379 1.07e-126
mRNA binding Hs molecular function 317 3.94e-103
mRNA 3'-UTR binding Hs molecular function 379 1.07e-126
protein binding Hs molecular function 379 1.07e-126
nucleus Hs cellular component 379 1.07e-126
nucleoplasm Hs cellular component 379 1.07e-126
cytoplasm Hs cellular component 379 1.07e-126
cytosol Hs cellular component 379 1.07e-126
membrane Hs cellular component 379 1.07e-126
intracellular ribonucleoprotein complex Hs cellular component 379 1.07e-126
ribonucleoprotein granule Hs cellular component 379 1.07e-126
transcription regulatory region DNA binding Hs molecular function 379 1.07e-126
pronucleus Hs cellular component 379 1.07e-126
perinuclear region of cytoplasm Hs cellular component 379 1.07e-126
extracellular exosome Hs cellular component 379 1.07e-126
pre-mRNA intronic binding Hs molecular function 379 1.07e-126
mRNA CDS binding Hs molecular function 379 1.07e-126

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleic acid binding SUPERFAMILY molecular function 1.63E-16
RNA binding TIGRFAM molecular function 7.2E-117
nucleus TIGRFAM cellular component 7.2E-117
mRNA processing TIGRFAM biological process 7.2E-117