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GENE CARD

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Gene Card

Best human hits

FAT1; FAT3; MUC13

Species

P.mammillata

Unique Gene ID

Phmamm.g00013167

Gene Model ID

Phmamm.CG.MTP2014.S995.g13167

Location

S995:38046..42851

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S995.g13167.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA151YD12

Plate: Plate_151_D12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
EGF-like_CS ProSitePatterns EGF-like, conserved site
EGF-like_dom SMART EGF-like domain
HEG PANTHER Protein HEG
EGF-like_dom ProSiteProfiles EGF-like domain

GOSlim

24 results

GO Term Annotation Origin Type
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
nucleus Blast cellular component
cytoplasm Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
focal adhesion Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
apical plasma membrane Blast cellular component
lamellipodium Blast cellular component
cell junction Blast cellular component
protein homodimerization activity Blast molecular function
perinuclear region of cytoplasm Blast cellular component
extracellular exosome Blast cellular component
heart development InterProScan biological process
Golgi apparatus part Blast cellular component
intracellular organelle lumen Blast cellular component
plasma membrane region Blast cellular component
cell projection Blast cellular component
cytoskeletal part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
calcium ion binding Hs molecular function 61.6 7.49e-10
protein binding Hs molecular function 61.6 7.49e-10
extracellular region Hs cellular component 55.1 4.05e-08
extracellular space Hs cellular component 55.1 4.05e-08
nucleus Hs cellular component 61.6 7.49e-10
cytoplasm Hs cellular component 61.6 7.49e-10
Golgi lumen Hs cellular component 55.1 4.05e-08
cytosol Hs cellular component 55.1 4.05e-08
plasma membrane Hs cellular component 61.6 7.49e-10
integral component of plasma membrane Hs cellular component 61.6 7.49e-10
cell-cell junction Hs cellular component 61.6 7.49e-10
focal adhesion Hs cellular component 61.6 7.49e-10
membrane Hs cellular component 61.6 7.49e-10
integral component of membrane Hs cellular component 61.6 7.49e-10
apical plasma membrane Hs cellular component 55.1 4.05e-08
lamellipodium Hs cellular component 61.6 7.49e-10
cell junction Hs cellular component 61.6 7.49e-10
filopodium Hs cellular component 61.6 7.49e-10
protein homodimerization activity Hs molecular function 55.1 4.05e-08
perinuclear region of cytoplasm Hs cellular component 61.6 7.49e-10
extracellular exosome Hs cellular component 61.6 7.49e-10

GO (InterProScan)

2 results

GO Term Analysis Type e-value
cell-cell junction assembly PANTHER biological process 7.4E-42
heart development PANTHER biological process 7.4E-42