Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S7...'

Gene Card

Best human hits

ADGRB2; ADGRB3; HMCN1

Species

P.mammillata

Unique Gene ID

Phmamm.g00011509

Gene Model ID

Phmamm.CG.MTP2014.S724.g11509

Location

S724:72107..75808

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S724.g11509.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA47YJ21

Plate: Plate_47_J21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
TSP1_rpt_sf SUPERFAMILY Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt SMART Thrombospondin type-1 (TSP1) repeat
TSP1_rpt_sf Gene3D Thrombospondin type-1 (TSP1) repeat superfamily
TSP1_rpt ProSiteProfiles Thrombospondin type-1 (TSP1) repeat
TSP1_rpt Pfam Thrombospondin type-1 (TSP1) repeat

GOSlim

20 results

GO Term Annotation Origin Type
signal transducer activity Blast molecular function
transmembrane signaling receptor activity Blast molecular function
G-protein coupled receptor activity Blast molecular function
GTPase activator activity Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
cytoplasm Blast cellular component
centrosome Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cell junction Blast cellular component
extracellular exosome Blast cellular component
postsynapse Blast cellular component
extracellular region part Blast cellular component
cell periphery Blast cellular component
cytoplasmic part Blast cellular component
plasma membrane region Blast cellular component
synapse part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
signal transducer activity Hs molecular function 87.0 2.22e-17
transmembrane signaling receptor activity Hs molecular function 87.0 2.22e-17
G-protein coupled receptor activity Hs molecular function 87.0 2.22e-17
GTPase activator activity Hs molecular function 82.0 7.74e-16
calcium ion binding Hs molecular function 97.1 1.91e-20
protein binding Hs molecular function 87.0 2.22e-17
extracellular region Hs cellular component 97.1 1.91e-20
proteinaceous extracellular matrix Hs cellular component 97.1 1.91e-20
basement membrane Hs cellular component 97.1 1.91e-20
cytoplasm Hs cellular component 97.1 1.91e-20
centrosome Hs cellular component 87.0 2.22e-17
plasma membrane Hs cellular component 87.0 2.22e-17
cell cortex Hs cellular component 97.1 1.91e-20
membrane Hs cellular component 87.0 2.22e-17
integral component of membrane Hs cellular component 87.0 2.22e-17
cell junction Hs cellular component 97.1 1.91e-20
extracellular matrix Hs cellular component 97.1 1.91e-20
cleavage furrow Hs cellular component 97.1 1.91e-20
synaptic cleft Hs cellular component 82.0 7.74e-16
extracellular exosome Hs cellular component 97.1 1.91e-20
postsynapse Hs cellular component 82.0 7.74e-16

GO (InterProScan)

No result

GO Term Analysis Type e-value