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GENE CARD

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Gene Card

Best human hits

CLPX; PSMC3; YME1L1

Species

P.mammillata

Unique Gene ID

Phmamm.g00010713

Gene Model ID

Phmamm.CG.MTP2014.S627.g10713

Location

S627:81657..87389

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S627.g10713.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

47 results

AHC0AAA10YK09

Plate: Plate_10_K09

AHC0AAA11YJ18

Plate: Plate_11_J18

AHC0AAA13YB20

Plate: Plate_13_B20

AHC0AAA15YH21

Plate: Plate_15_H21

AHC0AAA19YH16

Plate: Plate_19_H16

AHC0AAA2YL20

Plate: Plate_2_L20

AHC0AAA25YB02

Plate: Plate_25_B02

AHC0AAA26YK02

Plate: Plate_26_K02

AHC0AAA9YD22

Plate: Plate_9_D22

AHC0AAA31YM23

Plate: Plate_31_M23

AHC0AAA32YE06

Plate: Plate_32_E06

AHC0AAA32YO17

Plate: Plate_32_O17

AHC0AAA39YO05

Plate: Plate_39_O05

AHC0AAA47YE03

Plate: Plate_47_E03

AHC0AAA68YJ10

Plate: Plate_68_J10

AHC0AAA76YH03

Plate: Plate_76_H03

AHC0AAA122YK12

Plate: Plate_122_K12

AHC0AAA124YD06

Plate: Plate_124_D06

AHC0AAA128YP18

Plate: Plate_128_P18

AHC0AAA129YL08

Plate: Plate_129_L08

AHC0AAA136YO23

Plate: Plate_136_O23

AHC0AAA138YM07

Plate: Plate_138_M07

AHC0AAA141YP05

Plate: Plate_141_P05

AHC0AAA143YP18

Plate: Plate_143_P18

AHC0AAA147YE23

Plate: Plate_147_E23

AHC0AAA149YH17

Plate: Plate_149_H17

AHC0AAA150YL03

Plate: Plate_150_L03

AHC0AAA155YB20

Plate: Plate_155_B20

AHC0AAA82YL24

Plate: Plate_82_L24

AHC0AAA147YE21

Plate: Plate_147_E21

AHC0AAA170YP19

Plate: Plate_170_P19

AHC0AAA181YP20

Plate: Plate_181_P20

AHC0AAA186YP16

Plate: Plate_186_P16

AHC0AAA188YN14

Plate: Plate_188_N14

AHC0AAA189YC13

Plate: Plate_189_C13

AHC0AAA201YE16

Plate: Plate_201_E16

AHC0AAA205YF24

Plate: Plate_205_F24

AHC0AAA215YD17

Plate: Plate_215_D17

AHC0AAA221YN16

Plate: Plate_221_N16

AHC0AAA226YE24

Plate: Plate_226_E24

AHC0AAA235YF15

Plate: Plate_235_F15

AHC0AAA236YF23

Plate: Plate_236_F23

AHC0AAA240YJ08

Plate: Plate_240_J08

AHC0AAA250YD08

Plate: Plate_250_D08

AHC0AAA255YD22

Plate: Plate_255_D22

AHC0AAA269YM01

Plate: Plate_269_M01

AHC0AAA39YA03

Plate: Plate_39_A03

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
AAA+_ATPase SMART AAA+ ATPase domain
Clp_protease_ATP-bd_su_ClpX PANTHER Clp protease, ATP-binding subunit ClpX
ATPase_AAA_core Pfam ATPase, AAA-type, core
Clp_ATPase_C Pfam Clp ATPase, C-terminal
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Clp_ATPase_C SMART Clp ATPase, C-terminal

GOSlim

39 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
metalloendopeptidase activity Blast molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
extracellular region Blast cellular component
nucleus Blast cellular component
nucleoplasm Orthology cellular component
cytoplasm Blast cellular component
mitochondrion Orthology cellular component
mitochondrial inner membrane Orthology cellular component
mitochondrial matrix Orthology cellular component
cytosol Orthology cellular component
protein folding Orthology biological process
proteolysis Orthology biological process
peptidase activity Orthology molecular function
metallopeptidase activity Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
nuclear body Blast cellular component
hydrolase activity Blast molecular function
identical protein binding Blast molecular function
metal ion binding Orthology molecular function
unfolded protein binding Orthology molecular function
peptidase activity, acting on L-amino acid peptides Orthology molecular function
nucleoside-triphosphatase activity Orthology molecular function
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
positive regulation of hydrolase activity Orthology biological process
enzyme binding Orthology molecular function
enzyme activator activity Orthology molecular function
intracellular non-membrane-bounded organelle Orthology cellular component
metabolic process Orthology biological process
cytoplasmic part Blast cellular component
transcription factor binding Blast molecular function
nuclear lumen Blast cellular component
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
ATP-dependent peptidase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial inner membrane Hs cellular component
mitochondrial matrix Hs cellular component
cytosol Hs cellular component
protein folding Hs biological process
endopeptidase Clp complex Hs cellular component
mitochondrial endopeptidase Clp complex Hs cellular component
positive regulation of peptidase activity Hs biological process
peptidase activator activity Hs molecular function
ATPase activity Hs molecular function
mitochondrial nucleoid Hs cellular component
ATP metabolic process Hs biological process
metal ion binding Hs molecular function
unfolded protein binding Hs molecular function
proteolysis involved in cellular protein catabolic process Hs biological process

GO (Blast)

37 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 533 0.0
proteasome complex Hs cellular component 45.1 8.65e-05
P-body Hs cellular component 45.1 8.65e-05
ATP-dependent peptidase activity Hs molecular function 533 0.0
metalloendopeptidase activity Hs molecular function 45.4 7.94e-05
protein binding Hs molecular function 533 0.0
ATP binding Hs molecular function 533 0.0
extracellular region Hs cellular component 45.1 8.65e-05
nucleus Hs cellular component 45.1 8.65e-05
nucleoplasm Hs cellular component 533 0.0
cytoplasm Hs cellular component 45.1 8.65e-05
mitochondrion Hs cellular component 533 0.0
mitochondrial inner membrane Hs cellular component 533 0.0
mitochondrial matrix Hs cellular component 533 0.0
cytosol Hs cellular component 533 0.0
peptidase activity Hs molecular function 45.4 7.94e-05
metallopeptidase activity Hs molecular function 45.4 7.94e-05
proteasome regulatory particle, base subcomplex Hs cellular component 45.1 8.65e-05
endopeptidase Clp complex Hs cellular component 533 0.0
mitochondrial endopeptidase Clp complex Hs cellular component 533 0.0
membrane Hs cellular component 45.4 7.94e-05
integral component of membrane Hs cellular component 45.4 7.94e-05
peptidase activator activity Hs molecular function 533 0.0
nuclear body Hs cellular component 45.4 7.94e-05
hydrolase activity Hs molecular function 45.4 7.94e-05
ATPase activity Hs molecular function 533 0.0
TBP-class protein binding Hs molecular function 45.1 8.65e-05
proteasome accessory complex Hs cellular component 45.1 8.65e-05
nuclear proteasome complex Hs cellular component 45.1 8.65e-05
cytosolic proteasome complex Hs cellular component 45.1 8.65e-05
secretory granule lumen Hs cellular component 45.1 8.65e-05
proteasome-activating ATPase activity Hs molecular function 45.1 8.65e-05
mitochondrial nucleoid Hs cellular component 533 0.0
identical protein binding Hs molecular function 45.1 8.65e-05
metal ion binding Hs molecular function 533 0.0
unfolded protein binding Hs molecular function 533 0.0
ficolin-1-rich granule lumen Hs cellular component 45.1 8.65e-05

GO (InterProScan)

3 results

GO Term Analysis Type e-value
ATP binding PANTHER molecular function 3.5E-181
protein folding PANTHER biological process 3.5E-181
unfolded protein binding PANTHER molecular function 3.5E-181