- Gene 'Phmamm.CG.MTP2014.S4...'
Gene Card
Best human hits
PARN; PNLDC1
Species
Unique Gene ID
Phmamm.g00009042
Gene Model ID
Phmamm.CG.MTP2014.S465.g09042
Location
S465:42628..47129
Transcript Models and Sequences
AHC0AAA17YB17
Plate: Plate_17_B17
AHC0AAA21YE11
Plate: Plate_21_E11
AHC0AAA34YO12
Plate: Plate_34_O12
AHC0AAA44YC09
Plate: Plate_44_C09
AHC0AAA46YE02
Plate: Plate_46_E02
AHC0AAA59YJ20
Plate: Plate_59_J20
AHC0AAA73YD14
Plate: Plate_73_D14
AHC0AAA109YP16
Plate: Plate_109_P16
AHC0AAA117YB09
Plate: Plate_117_B09
AHC0AAA120YL04
Plate: Plate_120_L04
AHC0AAA128YN05
Plate: Plate_128_N05
AHC0AAA140YD24
Plate: Plate_140_D24
AHC0AAA147YD14
Plate: Plate_147_D14
AHC0AAA150YA23
Plate: Plate_150_A23
AHC0AAA92YI10
Plate: Plate_92_I10
AHC0AAA120YL02
Plate: Plate_120_L02
AHC0AAA147YF16
Plate: Plate_147_F16
AHC0AAA186YN08
Plate: Plate_186_N08
AHC0AAA188YH17
Plate: Plate_188_H17
AHC0AAA201YB23
Plate: Plate_201_B23
AHC0AAA214YA15
Plate: Plate_214_A15
AHC0AAA229YC15
Plate: Plate_229_C15
AHC0AAA231YA11
Plate: Plate_231_A11
AHC0AAA249YJ04
Plate: Plate_249_J04
AHC0AAA254YB22
Plate: Plate_254_B22
AHC0AAA259YP07
Plate: Plate_259_P07
AHC0AAA269YK22
Plate: Plate_269_K22
AHC0AAA92YK12
Plate: Plate_92_K12
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
IPR Term | Analysis | Definition |
---|---|---|
R3H_dom_sf | SUPERFAMILY | R3H domain superfamily |
RNaseH-like_sf | SUPERFAMILY | Ribonuclease H-like superfamily |
RNaseH_sf | Gene3D | Ribonuclease H superfamily |
RNase_CAF1 | Pfam | Ribonuclease CAF1 |
GO Term | Annotation Origin | Type |
---|---|---|
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Orthology | biological process |
nucleic acid binding | Orthology | molecular function |
RNA binding | Orthology | molecular function |
protein binding | Orthology | molecular function |
nucleus | Orthology | cellular component |
nucleolus | Orthology | cellular component |
cytoplasm | Orthology | cellular component |
endoplasmic reticulum | Blast | cellular component |
endoplasmic reticulum membrane | Blast | cellular component |
cytosol | Orthology | cellular component |
mRNA catabolic process | Orthology | biological process |
membrane | Blast | cellular component |
integral component of membrane | Blast | cellular component |
hydrolase activity | Orthology | molecular function |
protein kinase binding | Orthology | molecular function |
cation binding | Orthology | molecular function |
metal ion binding | Orthology | molecular function |
nuclear-transcribed mRNA catabolic process | Orthology | biological process |
RNA metabolic process | Orthology | biological process |
gamete generation | Orthology | biological process |
organelle organization | Orthology | biological process |
DNA metabolic process | Orthology | biological process |
transferase activity, transferring phosphorus-containing groups | Orthology | molecular function |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|---|---|
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Hs | biological process |
nuclear-transcribed mRNA poly(A) tail shortening | Hs | biological process |
nucleic acid binding | Hs | molecular function |
RNA binding | Hs | molecular function |
mRNA 3'-UTR binding | Hs | molecular function |
nuclease activity | Hs | molecular function |
exonuclease activity | Hs | molecular function |
poly(A)-specific ribonuclease activity | Hs | molecular function |
protein binding | Hs | molecular function |
nucleus | Hs | cellular component |
nucleolus | Hs | cellular component |
cytoplasm | Hs | cellular component |
cytosol | Hs | cellular component |
mRNA catabolic process | Hs | biological process |
female gamete generation | Hs | biological process |
RNA modification | Hs | biological process |
hydrolase activity | Hs | molecular function |
protein kinase binding | Hs | molecular function |
positive regulation of telomere maintenance via telomerase | Hs | biological process |
cation binding | Hs | molecular function |
regulation of mRNA stability | Hs | biological process |
metal ion binding | Hs | molecular function |
telomerase RNA binding | Hs | molecular function |
RNA phosphodiester bond hydrolysis, exonucleolytic | Hs | biological process |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
nucleic acid binding | Hs | molecular function | 280 | 8.67e-87 |
RNA binding | Hs | molecular function | 280 | 8.67e-87 |
mRNA 3'-UTR binding | Hs | molecular function | 280 | 8.67e-87 |
nuclease activity | Hs | molecular function | 280 | 8.67e-87 |
exonuclease activity | Hs | molecular function | 280 | 8.67e-87 |
poly(A)-specific ribonuclease activity | Hs | molecular function | 280 | 8.67e-87 |
protein binding | Hs | molecular function | 280 | 8.67e-87 |
nucleus | Hs | cellular component | 280 | 8.67e-87 |
nucleolus | Hs | cellular component | 280 | 8.67e-87 |
cytoplasm | Hs | cellular component | 280 | 8.67e-87 |
endoplasmic reticulum | Hs | cellular component | 119 | 1.52e-28 |
endoplasmic reticulum membrane | Hs | cellular component | 119 | 1.52e-28 |
cytosol | Hs | cellular component | 280 | 8.67e-87 |
membrane | Hs | cellular component | 119 | 1.52e-28 |
integral component of membrane | Hs | cellular component | 119 | 1.52e-28 |
hydrolase activity | Hs | molecular function | 280 | 8.67e-87 |
protein kinase binding | Hs | molecular function | 280 | 8.67e-87 |
cation binding | Hs | molecular function | 280 | 8.67e-87 |
metal ion binding | Hs | molecular function | 280 | 8.67e-87 |
telomerase RNA binding | Hs | molecular function | 280 | 8.67e-87 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleic acid binding | Gene3D | molecular function | 1.9E-52 |