Aniseed - Gene card

Gene Card

Best human hits

RNF219; RNFT1; RNFT2

Species

P.mammillata

Unique Gene ID

Phmamm.g00008918

Gene Model ID

Phmamm.CG.MTP2014.S453.g08918

Location

S453:94279..98457

Transcript Models and Sequences

Phmamm.CG.MTP2014.S453.g08918.01.t
Phmamm.CG.MTP2014.S453.g08918.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

27 results

AHC0AAA92YN08

Plate: Plate_92_N08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
RNF219_RING-HC	CDD	RING finger protein 219, RING finger
Znf_RING	ProSiteProfiles	Zinc finger, RING-type
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type

GOSlim

7 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
transferase activity	Blast	molecular function
metal ion binding	Orthology	molecular function

GO (Orthology)

2 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
metal ion binding	Hs	molecular function

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	191	3.45e-52
endoplasmic reticulum	Hs	cellular component	49.3	4.08e-06
endoplasmic reticulum membrane	Hs	cellular component	49.3	4.08e-06
membrane	Hs	cellular component	52.4	5.59e-07
integral component of membrane	Hs	cellular component	52.4	5.59e-07
transferase activity	Hs	molecular function	49.3	4.08e-06
metal ion binding	Hs	molecular function	191	3.45e-52

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value