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GENE CARD

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Gene Card

Best human hits

AGAP3; GIT1; GIT2

Species

P.mammillata

Unique Gene ID

Phmamm.g00008900

Gene Model ID

Phmamm.CG.MTP2014.S452.g08900

Location

S452:34288..44762

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

19 results

AHC0AAA23YF18

Plate: Plate_23_F18

AHC0AAA9YE13

Plate: Plate_9_E13

AHC0AAA69YG15

Plate: Plate_69_G15

AHC0AAA115YD19

Plate: Plate_115_D19

AHC0AAA116YM07

Plate: Plate_116_M07

AHC0AAA126YM24

Plate: Plate_126_M24

AHC0AAA89YF16

Plate: Plate_89_F16

AHC0AAA92YK10

Plate: Plate_92_K10

AHC0AAA168YF07

Plate: Plate_168_F07

AHC0AAA168YG22

Plate: Plate_168_G22

AHC0AAA184YK15

Plate: Plate_184_K15

AHC0AAA212YH07

Plate: Plate_212_H07

AHC0AAA217YP23

Plate: Plate_217_P23

AHC0AAA230YC07

Plate: Plate_230_C07

AHC0AAA246YH13

Plate: Plate_246_H13

AHC0AAA250YJ20

Plate: Plate_250_J20

AHC0AAA259YJ14

Plate: Plate_259_J14

AHC0AAA261YM06

Plate: Plate_261_M06

AHC0AAA92YM12

Plate: Plate_92_M12

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

16 results

IPR Term Analysis Definition
Ankyrin_rpt SMART Ankyrin repeat
Ankyrin_rpt-contain_dom CDD Ankyrin repeat-containing domain
Ankyrin_rpt-contain_sf Gene3D Ankyrin repeat-containing domain superfamily
Ankyrin_rpt ProSiteProfiles Ankyrin repeat
GIT1_C Pfam ARF GTPase-activating protein GIT1, C-terminal
GIT_SHD Pfam GIT, Spa2 homology (SHD) domain
ARFGAP/RecO SUPERFAMILY ARFGAP/RecO-like zinc finger
ArfGAP_dom PRINTS Arf GTPase activating protein
ArfGAP_dom SMART Arf GTPase activating protein
ArfGAP_dom ProSiteProfiles Arf GTPase activating protein
GIT_SHD SMART GIT, Spa2 homology (SHD) domain
Ankyrin_rpt-contain_dom ProSiteProfiles Ankyrin repeat-containing domain
ArfGAP_dom Pfam Arf GTPase activating protein
Ankyrin_rpt Pfam Ankyrin repeat
ArfGAP_dom_sf Gene3D ArfGAP domain superfamily
Ankyrin_rpt-contain_sf SUPERFAMILY Ankyrin repeat-containing domain superfamily

GOSlim

19 results

GO Term Annotation Origin Type
nucleotide binding Blast molecular function
GTPase activity Blast molecular function
GTPase activator activity Orthology molecular function
protein binding Orthology molecular function
GTP binding Blast molecular function
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
focal adhesion Orthology cellular component
membrane Orthology cellular component
kinase activity Orthology molecular function
phosphorylation Orthology biological process
positive regulation of GTPase activity Orthology biological process
metal ion binding Orthology molecular function
G-protein coupled receptor signaling pathway Orthology biological process
regulation of signal transduction Orthology biological process
membrane organization Orthology biological process
cell division Orthology biological process
cell surface receptor signaling pathway Orthology biological process

GO (Orthology)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
GTPase activator activity Hs molecular function
protein binding Hs molecular function
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
focal adhesion Hs cellular component
regulation of G-protein coupled receptor protein signaling pathway Hs biological process
membrane Hs cellular component
kinase activity Hs molecular function
phosphorylation Hs biological process
regulation of cytokinesis Hs biological process
positive regulation of GTPase activity Hs biological process
metal ion binding Hs molecular function
ephrin receptor signaling pathway Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 122 1.27e-28
GTPase activity Hs molecular function 122 1.27e-28
GTPase activator activity Hs molecular function 528 5.55e-178
protein binding Hs molecular function 528 5.55e-178
GTP binding Hs molecular function 122 1.27e-28
nucleoplasm Hs cellular component 528 5.55e-178
cytoplasm Hs cellular component 451 3.82e-148
cytosol Hs cellular component 451 3.82e-148
focal adhesion Hs cellular component 528 5.55e-178
membrane Hs cellular component 451 3.82e-148
kinase activity Hs molecular function 528 5.55e-178
metal ion binding Hs molecular function 528 5.55e-178

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activator activity SMART molecular function 1.5E-32
protein binding Pfam molecular function 3.4E-4