Aniseed - Gene card

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

32 results

AHC0AAA38YM11

Plate: Plate_38_M11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Phox	SMART	Phox homologous domain
Phox	Pfam	Phox homologous domain
SNX4	PANTHER	Sorting nexin-4
PX_dom_sf	SUPERFAMILY	PX domain superfamily
PX_dom_sf	Gene3D	PX domain superfamily
Phox	ProSiteProfiles	Phox homologous domain
AH/BAR_dom_sf	Gene3D	AH/BAR domain superfamily

GOSlim

32 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
intracellular	Blast	cellular component
cytoplasm	Orthology	cellular component
lysosome	Blast	cellular component
endosome	Orthology	cellular component
cytosol	Blast	cellular component
plasma membrane	Orthology	cellular component
protein transport	Orthology	biological process
membrane	Orthology	cellular component
lamellipodium	Blast	cellular component
macromolecular complex	Orthology	cellular component
protein homodimerization activity	Blast	molecular function
cell projection	Blast	cellular component
protein heterodimerization activity	Blast	molecular function
extracellular exosome	Blast	cellular component
receptor binding	Orthology	molecular function
macromolecular complex binding	Orthology	molecular function
cytoskeletal part	Orthology	cellular component
microtubule cytoskeleton	Orthology	cellular component
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
binding	Orthology	molecular function
membrane part	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
whole membrane	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
early endosome	Orthology	cellular component
bounding membrane of organelle	Orthology	cellular component
intracellular transport	Orthology	biological process
anion binding	Orthology	molecular function
endomembrane system	Blast	cellular component
cell adhesion molecule binding	Blast	molecular function

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
epidermal growth factor receptor binding	Hs	molecular function
insulin receptor binding	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
endosome	Hs	cellular component
cytoplasmic dynein complex	Hs	cellular component
plasma membrane	Hs	cellular component
endocytosis	Hs	biological process
lipid binding	Hs	molecular function
protein transport	Hs	biological process
membrane	Hs	cellular component
vesicle organization	Hs	biological process
extrinsic component of membrane	Hs	cellular component
SNARE complex	Hs	cellular component
early endosome membrane	Hs	cellular component
endocytic recycling	Hs	biological process
macromolecular complex	Hs	cellular component
phosphatidylinositol binding	Hs	molecular function
transferrin receptor binding	Hs	molecular function
leptin receptor binding	Hs	molecular function

GO (Blast)

28 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
epidermal growth factor receptor binding	Hs	molecular function	369	1.49e-124
insulin receptor binding	Hs	molecular function	369	1.49e-124
protein binding	Hs	molecular function	369	1.49e-124
intracellular	Hs	cellular component	78.6	1.49e-15
cytoplasm	Hs	cellular component	369	1.49e-124
lysosome	Hs	cellular component	78.6	1.49e-15
endosome	Hs	cellular component	369	1.49e-124
cytosol	Hs	cellular component	78.6	1.49e-15
cytoplasmic dynein complex	Hs	cellular component	369	1.49e-124
plasma membrane	Hs	cellular component	369	1.49e-124
lipid binding	Hs	molecular function	369	1.49e-124
endosome membrane	Hs	cellular component	78.6	1.49e-15
membrane	Hs	cellular component	369	1.49e-124
extrinsic component of membrane	Hs	cellular component	369	1.49e-124
lamellipodium	Hs	cellular component	78.6	1.49e-15
retromer complex	Hs	cellular component	78.6	1.49e-15
retromer, tubulation complex	Hs	cellular component	78.6	1.49e-15
SNARE complex	Hs	cellular component	369	1.49e-124
early endosome membrane	Hs	cellular component	369	1.49e-124
macromolecular complex	Hs	cellular component	369	1.49e-124
phosphatidylinositol binding	Hs	molecular function	369	1.49e-124
protein homodimerization activity	Hs	molecular function	78.6	1.49e-15
cell projection	Hs	cellular component	78.6	1.49e-15
cadherin binding	Hs	molecular function	78.6	1.49e-15
protein heterodimerization activity	Hs	molecular function	78.6	1.49e-15
extracellular exosome	Hs	cellular component	78.6	1.49e-15
transferrin receptor binding	Hs	molecular function	369	1.49e-124
leptin receptor binding	Hs	molecular function	369	1.49e-124

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
protein transport	PANTHER	biological process	1.7E-112
phosphatidylinositol binding	Gene3D	molecular function	5.8E-30

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences