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GENE CARD

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Gene Card

Best human hits

NECTIN1; NECTIN3; PVR

Species

P.mammillata

Unique Gene ID

Phmamm.g00008237

Gene Model ID

Phmamm.CG.MTP2014.S393.g08237

Location

S393:127949..133598

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S393.g08237.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

12 results

AHC0AAA23YJ20

Plate: Plate_23_J20

AHC0AAA4YJ18

Plate: Plate_4_J18

AHC0AAA30YP02

Plate: Plate_30_P02

AHC0AAA31YK06

Plate: Plate_31_K06

AHC0AAA67YD03

Plate: Plate_67_D03

AHC0AAA77YN01

Plate: Plate_77_N01

AHC0AAA99YC10

Plate: Plate_99_C10

AHC0AAA201YO08

Plate: Plate_201_O08

AHC0AAA240YC17

Plate: Plate_240_C17

AHC0AAA255YC02

Plate: Plate_255_C02

AHC0AAA257YM13

Plate: Plate_257_M13

AHC0AAA268YL07

Plate: Plate_268_L07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Ig-like_dom_sf SUPERFAMILY Immunoglobulin-like domain superfamily
Ig-like_dom ProSiteProfiles Immunoglobulin-like domain
Ig-like_fold Gene3D Immunoglobulin-like fold
CD80_C2-set Pfam CD80-like, immunoglobulin C2-set

GOSlim

30 results

GO Term Annotation Origin Type
receptor binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cytoplasm Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
adherens junction Blast cellular component
focal adhesion Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
cell junction Blast cellular component
axon Blast cellular component
identical protein binding Blast molecular function
protein homodimerization activity Blast molecular function
neuron projection Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
synapse Blast cellular component
postsynaptic membrane Blast cellular component
protein heterodimerization activity Blast molecular function
cell adhesion molecule binding Blast molecular function
extracellular exosome Blast cellular component
binding Blast molecular function
signaling receptor activity Blast molecular function
plasma membrane part Blast cellular component
macromolecular complex Blast cellular component
cell projection part Blast cellular component
synaptic membrane Blast cellular component
neuron part Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
virus receptor activity Hs molecular function 82.4 9.96e-17
receptor activity Hs molecular function 112 3.77e-26
receptor binding Hs molecular function 112 3.77e-26
protein binding Hs molecular function 112 3.77e-26
extracellular region Hs cellular component 82.4 9.96e-17
extracellular space Hs cellular component 82.4 9.96e-17
cytoplasm Hs cellular component 82.4 9.96e-17
plasma membrane Hs cellular component 112 3.77e-26
integral component of plasma membrane Hs cellular component 112 3.77e-26
cell-cell junction Hs cellular component 112 3.77e-26
adherens junction Hs cellular component 73.6 1.09e-13
cell-cell adherens junction Hs cellular component 112 3.77e-26
focal adhesion Hs cellular component 82.4 9.96e-17
cell surface Hs cellular component 82.4 9.96e-17
coreceptor activity Hs molecular function 73.6 1.09e-13
membrane Hs cellular component 112 3.77e-26
integral component of membrane Hs cellular component 112 3.77e-26
catenin complex Hs cellular component 73.6 1.09e-13
cell junction Hs cellular component 112 3.77e-26
carbohydrate binding Hs molecular function 73.6 1.09e-13
axon Hs cellular component 73.6 1.09e-13
growth cone membrane Hs cellular component 73.6 1.09e-13
presynaptic membrane Hs cellular component 73.6 1.09e-13
identical protein binding Hs molecular function 73.6 1.09e-13
protein homodimerization activity Hs molecular function 112 3.77e-26
neuron projection Hs cellular component 73.6 1.09e-13
intracellular membrane-bounded organelle Hs cellular component 73.6 1.09e-13
apical junction complex Hs cellular component 112 3.77e-26
cell-cell contact zone Hs cellular component 112 3.77e-26
synapse Hs cellular component 112 3.77e-26
postsynaptic membrane Hs cellular component 112 3.77e-26
virion binding Hs molecular function 73.6 1.09e-13
protein heterodimerization activity Hs molecular function 112 3.77e-26
cell adhesion molecule binding Hs molecular function 112 3.77e-26
extracellular exosome Hs cellular component 82.4 9.96e-17

GO (InterProScan)

No result

GO Term Analysis Type e-value