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GENE CARD

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Gene Card

Best human hits

POLR3D

Species

P.mammillata

Unique Gene ID

Phmamm.g00007874

Gene Model ID

Phmamm.CG.MTP2014.S367.g07874

Location

S367:24726..28385

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S367.g07874.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA192YB15

Plate: Plate_192_B15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
RPC4 PANTHER DNA-directed RNA polymerase III subunit RPC4
RPC4 Pfam DNA-directed RNA polymerase III subunit RPC4

GOSlim

13 results

GO Term Annotation Origin Type
DNA binding Blast molecular function
chromatin binding Blast molecular function
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytosol Blast cellular component
nuclear speck Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
transcription, DNA-templated Blast biological process
transferase activity, transferring phosphorus-containing groups Blast molecular function
RNA biosynthetic process Blast biological process
nuclear part Blast cellular component
macromolecular complex Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 94.0 2.78e-22
RNA polymerase III activity Hs molecular function 94.0 2.78e-22
DNA binding Hs molecular function 94.0 2.78e-22
chromatin binding Hs molecular function 94.0 2.78e-22
DNA-directed 5'-3' RNA polymerase activity Hs molecular function 94.0 2.78e-22
nucleus Hs cellular component 94.0 2.78e-22
nucleoplasm Hs cellular component 94.0 2.78e-22
DNA-directed RNA polymerase III complex Hs cellular component 94.0 2.78e-22
cytosol Hs cellular component 94.0 2.78e-22
nuclear speck Hs cellular component 94.0 2.78e-22

GO (InterProScan)

4 results

GO Term Analysis Type e-value
DNA binding PANTHER molecular function 2.7E-34
DNA-directed 5'-3' RNA polymerase activity PANTHER molecular function 2.7E-34
DNA-directed RNA polymerase III complex PANTHER cellular component 2.7E-34
transcription from RNA polymerase III promoter PANTHER biological process 2.7E-34