Aniseed - Gene card

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Genoscope Yasuo Villefranche

112 results

AHC0AAA39YI08

Plate: Plate_39_I08

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Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
RBD_domain_sf	SUPERFAMILY	RNA-binding domain superfamily
Znf_CCHC_sf	SUPERFAMILY	Zinc finger, CCHC-type superfamily
NAD(P)-bd_dom_sf	SUPERFAMILY	NAD(P)-binding domain superfamily
Znf_CCHC	ProSiteProfiles	Zinc finger, CCHC-type
RRM_dom	ProSiteProfiles	RNA recognition motif domain
RRM_dom	Pfam	RNA recognition motif domain
Nucleotide-bd_a/b_plait_sf	Gene3D	Nucleotide-binding alpha-beta plait domain superfamily
Znf_CCHC	Pfam	Zinc finger, CCHC-type
Oxidoreductase_N	Pfam	Oxidoreductase, N-terminal
Znf_CCHC	SMART	Zinc finger, CCHC-type
RRM_dom	SMART	RNA recognition motif domain

GOSlim

15 results

GO Term	Annotation Origin	Type
nucleic acid binding	Blast	molecular function
RNA binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
zinc ion binding	Blast	molecular function
nuclear speck	Blast	cellular component
metal ion binding	Blast	molecular function
oxidation-reduction process	Orthology	biological process
extracellular exosome	Blast	cellular component
organic substance metabolic process	Orthology	biological process
catalytic activity	Orthology	molecular function
cellular metabolic process	Orthology	biological process
enzyme binding	Blast	molecular function

GO (Orthology)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
carbohydrate metabolic process	Hs	biological process
NAD(P)+ transhydrogenase activity	Hs	molecular function
electron carrier activity	Hs	molecular function
oxidoreductase activity	Hs	molecular function
electron transport chain	Hs	biological process
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity	Hs	molecular function
D-xylose 1-dehydrogenase (NADP+) activity	Hs	molecular function
oxidation-reduction process	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleic acid binding	Hs	molecular function	134	2.08e-36
RNA binding	Hs	molecular function	134	2.08e-36
protein binding	Hs	molecular function	134	2.08e-36
nucleus	Hs	cellular component	134	2.08e-36
nucleoplasm	Hs	cellular component	134	2.08e-36
cytoplasm	Hs	cellular component	134	2.08e-36
zinc ion binding	Hs	molecular function	134	2.08e-36
NAD(P)+ transhydrogenase activity	Hs	molecular function	238	1.02e-74
electron carrier activity	Hs	molecular function	238	1.02e-74
oxidoreductase activity	Hs	molecular function	238	1.02e-74
nuclear speck	Hs	cellular component	97.4	9.62e-24
protein domain specific binding	Hs	molecular function	134	2.08e-36
phospholipase binding	Hs	molecular function	97.4	9.62e-24
metal ion binding	Hs	molecular function	134	2.08e-36
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity	Hs	molecular function	238	1.02e-74
D-xylose 1-dehydrogenase (NADP+) activity	Hs	molecular function	238	1.02e-74
extracellular exosome	Hs	cellular component	134	2.08e-36
sequence-specific mRNA binding	Hs	molecular function	97.4	9.62e-24

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
nucleic acid binding	SUPERFAMILY	molecular function	2.42E-26
zinc ion binding	SUPERFAMILY	molecular function	1.53E-6
oxidoreductase activity	Pfam	molecular function	6.2E-20

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