Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S3...'

Gene Card

Best human hits

CTRB1; CTRB2; MALRD1

Species

P.mammillata

Unique Gene ID

Phmamm.g00007381

Gene Model ID

Phmamm.CG.MTP2014.S332.g07381

Location

S332:551..14113

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S332.g07381.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

17 results

IPR Term Analysis Definition
LDrepeatLR_classA_rpt ProSiteProfiles Low-density lipoprotein (LDL) receptor class A repeat
MAM_dom CDD MAM domain
Trypsin_dom SMART Serine proteases, trypsin domain
MAM_dom ProSiteProfiles MAM domain
Trypsin_dom CDD Serine proteases, trypsin domain
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
LDL_receptor-like_sf SUPERFAMILY LDL receptor-like superfamily
Trypsin_dom ProSiteProfiles Serine proteases, trypsin domain
MAM_dom Pfam MAM domain
Peptidase_S1_PA SUPERFAMILY Peptidase S1, PA clan
MAM_dom ProSitePatterns MAM domain
MAM_dom SMART MAM domain
TRYPSIN_HIS ProSitePatterns Serine proteases, trypsin family, histidine active site
Peptidase_S1A PRINTS Peptidase S1A, chymotrypsin family
LDrepeatLR_classA_rpt Pfam Low-density lipoprotein (LDL) receptor class A repeat
LDrepeatLR_classA_rpt SMART Low-density lipoprotein (LDL) receptor class A repeat
Trypsin_dom Pfam Serine proteases, trypsin domain

GOSlim

15 results

GO Term Annotation Origin Type
serine-type endopeptidase activity Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cytoplasm Blast cellular component
Golgi apparatus Blast cellular component
proteolysis InterProScan biological process
peptidase activity Blast molecular function
serine-type peptidase activity Blast molecular function
membrane Blast cellular component
integral component of membrane Blast cellular component
hydrolase activity Blast molecular function
cytoplasmic vesicle Blast cellular component
intracellular organelle part Blast cellular component
organelle membrane Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
serine-type endopeptidase activity Hs molecular function 167 3.04e-46
protein binding Hs molecular function 298 1.53e-82
extracellular region Hs cellular component 167 3.04e-46
extracellular space Hs cellular component 167 3.04e-46
cytoplasm Hs cellular component 298 1.53e-82
Golgi apparatus Hs cellular component 298 1.53e-82
peptidase activity Hs molecular function 167 3.04e-46
serine-type peptidase activity Hs molecular function 167 3.04e-46
membrane Hs cellular component 298 1.53e-82
integral component of membrane Hs cellular component 298 1.53e-82
hydrolase activity Hs molecular function 167 3.04e-46
cytoplasmic vesicle membrane Hs cellular component 298 1.53e-82
cytoplasmic vesicle Hs cellular component 298 1.53e-82

GO (InterProScan)

4 results

GO Term Analysis Type e-value
serine-type endopeptidase activity SMART molecular function 2.8E-74
protein binding SMART molecular function 7.6E-9
proteolysis SMART biological process 2.8E-74
membrane CDD cellular component 9.68319E-47