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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

PLOD1; PLOD2; PLOD3

Species

P.mammillata

Unique Gene ID

Phmamm.g00006886

Gene Model ID

Phmamm.CG.MTP2014.S297.g06886

Location

S297:133653..150263

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

14 results

AHC0AAA26YP14

Plate: Plate_26_P14

AHC0AAA37YF17

Plate: Plate_37_F17

AHC0AAA38YA07

Plate: Plate_38_A07

AHC0AAA42YF14

Plate: Plate_42_F14

AHC0AAA61YD16

Plate: Plate_61_D16

AHC0AAA64YF03

Plate: Plate_64_F03

AHC0AAA109YI24

Plate: Plate_109_I24

AHC0AAA129YG16

Plate: Plate_129_G16

AHC0AAA146YN08

Plate: Plate_146_N08

AHC0AAA206YM09

Plate: Plate_206_M09

AHC0AAA224YA14

Plate: Plate_224_A14

AHC0AAA259YJ18

Plate: Plate_259_J18

AHC0AAA260YK01

Plate: Plate_260_K01

AHC0AAA38YA05

Plate: Plate_38_A05

WashU Genome Browser

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Pro_4_hyd_alph SMART Prolyl 4-hydroxylase, alpha subunit
Oxoglu/Fe-dep_dioxygenase ProSiteProfiles Oxoglutarate/iron-dependent dioxygenase
Nucleotide-diphossugar_trans SUPERFAMILY Nucleotide-diphospho-sugar transferases

GOSlim

28 results

GO Term Annotation Origin Type
response to hypoxia Orthology biological process
iron ion binding Orthology molecular function
protein binding Orthology molecular function
endoplasmic reticulum Orthology cellular component
endoplasmic reticulum membrane Orthology cellular component
Golgi apparatus Orthology cellular component
cellular protein modification process Orthology biological process
protein localization Orthology biological process
membrane Orthology cellular component
protein homodimerization activity Orthology molecular function
metal ion binding Orthology molecular function
oxidation-reduction process Orthology biological process
extracellular exosome Orthology cellular component
Golgi apparatus part Orthology cellular component
catalytic activity Orthology molecular function
anatomical structure development Orthology biological process
nervous system development Orthology biological process
extracellular matrix organization Orthology biological process
bounding membrane of organelle Orthology cellular component
extracellular region part Orthology cellular component
small molecule binding Orthology molecular function
anion binding Orthology molecular function
coenzyme binding Orthology molecular function
cellular response to organic substance Orthology biological process
metabolic process Orthology biological process
transferase activity Orthology molecular function
anatomical structure morphogenesis Orthology biological process
macromolecular complex Orthology cellular component

GO (Orthology)

33 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
response to hypoxia Hs biological process
iron ion binding Hs molecular function
protein binding Hs molecular function
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
Golgi apparatus Hs cellular component
trans-Golgi network Hs cellular component
cellular protein modification process Hs biological process
protein O-linked glycosylation Hs biological process
protein localization Hs biological process
procollagen-lysine 5-dioxygenase activity Hs molecular function
epidermis development Hs biological process
membrane Hs cellular component
oxidoreductase activity Hs molecular function
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Hs molecular function
neural tube development Hs biological process
collagen fibril organization Hs biological process
rough endoplasmic reticulum membrane Hs cellular component
extracellular matrix Hs cellular component
L-ascorbic acid binding Hs molecular function
cellular response to hormone stimulus Hs biological process
collagen metabolic process Hs biological process
procollagen glucosyltransferase activity Hs molecular function
vasodilation Hs biological process
protein homodimerization activity Hs molecular function
metal ion binding Hs molecular function
epidermis morphogenesis Hs biological process
procollagen galactosyltransferase activity Hs molecular function
dioxygenase activity Hs molecular function
oxidation-reduction process Hs biological process
extracellular exosome Hs cellular component
basement membrane assembly Hs biological process
catalytic complex Hs cellular component

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
iron ion binding Hs molecular function 763 0.0
protein binding Hs molecular function 763 0.0
endoplasmic reticulum Hs cellular component 763 0.0
endoplasmic reticulum membrane Hs cellular component 763 0.0
Golgi apparatus Hs cellular component 763 0.0
trans-Golgi network Hs cellular component 763 0.0
procollagen-lysine 5-dioxygenase activity Hs molecular function 763 0.0
membrane Hs cellular component 763 0.0
oxidoreductase activity Hs molecular function 763 0.0
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Hs molecular function 763 0.0
rough endoplasmic reticulum membrane Hs cellular component 763 0.0
extracellular matrix Hs cellular component 763 0.0
L-ascorbic acid binding Hs molecular function 763 0.0
procollagen glucosyltransferase activity Hs molecular function 763 0.0
protein homodimerization activity Hs molecular function 743 0.0
metal ion binding Hs molecular function 763 0.0
procollagen galactosyltransferase activity Hs molecular function 763 0.0
dioxygenase activity Hs molecular function 763 0.0
extracellular exosome Hs cellular component 763 0.0
catalytic complex Hs cellular component 743 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
iron ion binding SMART molecular function 9.7E-17
oxidoreductase activity ProSiteProfiles molecular function 10.764
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen SMART molecular function 9.7E-17
L-ascorbic acid binding SMART molecular function 9.7E-17
oxidation-reduction process SMART biological process 9.7E-17