Aniseed - Gene card

Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

MED15

Species

P.mammillata

Unique Gene ID

Phmamm.g00006302

Gene Model ID

Phmamm.CG.MTP2014.S262.g06302

Location

S262:1697..12507

Transcript Models and Sequences

Phmamm.CG.MTP2014.S262.g06302.01.t
Phmamm.CG.MTP2014.S262.g06302.02.t
Phmamm.CG.MTP2014.S262.g06302.03.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

42 results

AHC0AAA254YI22

Plate: Plate_254_I22

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
Med15	Pfam	Mediator of RNA polymerase II transcription subunit 15

GOSlim

12 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
transcription initiation from RNA polymerase II promoter	Orthology	biological process
membrane	Orthology	cellular component
transcription cofactor activity	InterProScan	molecular function
nucleoplasm part	Orthology	cellular component
macromolecular complex	Orthology	cellular component

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription cofactor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription initiation from RNA polymerase II promoter	Hs	biological process
membrane	Hs	cellular component
mediator complex	Hs	cellular component

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II transcription cofactor activity	Hs	molecular function	182	6.10e-49
protein binding	Hs	molecular function	182	6.10e-49
nucleus	Hs	cellular component	182	6.10e-49
nucleoplasm	Hs	cellular component	182	6.10e-49
cytoplasm	Hs	cellular component	182	6.10e-49
membrane	Hs	cellular component	182	6.10e-49
mediator complex	Hs	cellular component	182	6.10e-49

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
RNA polymerase II transcription cofactor activity	Pfam	molecular function	3.9E-60
regulation of transcription from RNA polymerase II promoter	Pfam	biological process	3.9E-60
mediator complex	Pfam	cellular component	3.9E-60
transcription cofactor activity	Pfam	molecular function	3.9E-60