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  3. Gene 'KH2012:KH.C8.247' > 
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  5. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

ATAD5; CHTF18; RFC1

Species

P.mammillata

Unique Gene ID

Phmamm.g00006210

Gene Model ID

Phmamm.CG.MTP2014.S255.g06210

Location

S255:85948..92584

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S255.g06210.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

2 results

AHC0AAA144YC11

Plate: Plate_144_C11

AHC0AAA261YC06

Plate: Plate_261_C06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
AAA+_ATPase SMART AAA+ ATPase domain
ATPase_AAA_core Pfam ATPase, AAA-type, core
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

20 results

GO Term Annotation Origin Type
nucleotide binding Orthology molecular function
DNA binding Orthology molecular function
double-stranded DNA binding Blast molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Blast cellular component
cytoplasm Blast cellular component
cytosol Orthology cellular component
DNA replication Orthology biological process
cell cycle Orthology biological process
enzyme activator activity Blast molecular function
membrane Orthology cellular component
sequence-specific DNA binding Blast molecular function
extracellular exosome Blast cellular component
nucleoside-triphosphatase activity Orthology molecular function
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
macromolecular complex Orthology cellular component

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
DNA binding Hs molecular function
DNA clamp loader activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytosol Hs cellular component
DNA replication Hs biological process
cell cycle Hs biological process
membrane Hs cellular component
Ctf18 RFC-like complex Hs cellular component
single-stranded DNA-dependent ATPase activity Hs molecular function

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 256 1.92e-74
DNA binding Hs molecular function 256 1.92e-74
DNA clamp loader activity Hs molecular function 256 1.92e-74
double-stranded DNA binding Hs molecular function 103 6.60e-23
protein binding Hs molecular function 256 1.92e-74
ATP binding Hs molecular function 256 1.92e-74
nucleus Hs cellular component 256 1.92e-74
nucleoplasm Hs cellular component 256 1.92e-74
DNA replication factor C complex Hs cellular component 103 6.60e-23
nucleolus Hs cellular component 103 6.60e-23
cytoplasm Hs cellular component 103 6.60e-23
cytosol Hs cellular component 256 1.92e-74
enzyme activator activity Hs molecular function 103 6.60e-23
membrane Hs cellular component 256 1.92e-74
protein domain specific binding Hs molecular function 103 6.60e-23
Ctf18 RFC-like complex Hs cellular component 256 1.92e-74
single-stranded DNA-dependent ATPase activity Hs molecular function 256 1.92e-74
sequence-specific DNA binding Hs molecular function 103 6.60e-23
extracellular exosome Hs cellular component 103 6.60e-23

GO (InterProScan)

1 result

GO Term Analysis Type e-value
ATP binding Pfam molecular function 1.8E-13

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