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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

CDH11; CDH18; CDH6

Species

P.mammillata

Unique Gene ID

Phmamm.g00005813

Gene Model ID

Phmamm.CG.MTP2014.S232.g05813

Location

S232:138508..146782

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

8 results

AHC0AAA113YF05

Plate: Plate_113_F05

AHC0AAA156YE23

Plate: Plate_156_E23

AHC0AAA93YD05

Plate: Plate_93_D05

AHC0AAA183YL02

Plate: Plate_183_L02

AHC0AAA192YB21

Plate: Plate_192_B21

AHC0AAA204YL02

Plate: Plate_204_L02

AHC0AAA205YK08

Plate: Plate_205_K08

AHC0AAA219YK19

Plate: Plate_219_K19

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Cadherin Pfam Cadherin
Cadherin-like SUPERFAMILY Cadherin-like
Cadherin PRINTS Cadherin
Cadherin_cytoplasmic-dom Pfam Cadherin, cytoplasmic domain
Cadherin SMART Cadherin
Catenin_binding_dom_sf Gene3D Catenin binding domain superfamily
Cadherin_CS ProSitePatterns Cadherin conserved site

GOSlim

24 results

GO Term Annotation Origin Type
calcium ion binding Orthology molecular function
cytoplasm Blast cellular component
plasma membrane Orthology cellular component
cell adhesion Orthology biological process
membrane Orthology cellular component
integral component of membrane Orthology cellular component
metal ion binding Orthology molecular function
extracellular exosome Blast cellular component
receptor binding Orthology molecular function
protein binding Orthology molecular function
adherens junction Orthology cellular component
brain development Orthology biological process
negative regulation of cell proliferation Orthology biological process
cell surface Orthology cellular component
cell junction Orthology cellular component
cell periphery Orthology cellular component
cellular component organization Orthology biological process
blood vessel development Orthology biological process
cell surface receptor signaling pathway Orthology biological process
cellular response to organic substance Orthology biological process
plasma membrane part Orthology cellular component
enzyme binding Orthology molecular function
angiogenesis Orthology biological process
defense response Orthology biological process

GO (Orthology)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
calcium ion binding Hs molecular function
plasma membrane Hs cellular component
cell adhesion Hs biological process
homophilic cell adhesion via plasma membrane adhesion molecules Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
adherens junction organization Hs biological process
metal ion binding Hs molecular function
cell-cell adhesion Hs biological process
blood vessel maturation Hs biological process
receptor binding Hs molecular function
protein binding Hs molecular function
cell-cell junction Hs cellular component
adherens junction Hs cellular component
cell-cell adherens junction Hs cellular component
bicellular tight junction Hs cellular component
cell-cell junction assembly Hs biological process
transforming growth factor beta receptor signaling pathway Hs biological process
brain development Hs biological process
beta-catenin binding Hs molecular function
negative regulation of cell proliferation Hs biological process
external side of plasma membrane Hs cellular component
cell surface Hs cellular component
calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules Hs biological process
protein phosphatase binding Hs molecular function
cell junction Hs cellular component
ion channel binding Hs molecular function
positive regulation of angiogenesis Hs biological process
negative regulation of inflammatory response Hs biological process
cell periphery Hs cellular component
regulation of establishment of cell polarity Hs biological process

GO (Blast)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
calcium ion binding Hs molecular function 300 1.16e-92
cytoplasm Hs cellular component 277 4.73e-84
plasma membrane Hs cellular component 300 1.16e-92
membrane Hs cellular component 300 1.16e-92
integral component of membrane Hs cellular component 300 1.16e-92
metal ion binding Hs molecular function 300 1.16e-92
extracellular exosome Hs cellular component 290 5.21e-89

GO (InterProScan)

6 results

GO Term Analysis Type e-value
calcium ion binding Pfam molecular function 7.5E-46
plasma membrane ProSitePatterns cellular component
cell adhesion ProSitePatterns biological process
homophilic cell adhesion via plasma membrane adhesion molecules Pfam biological process 7.5E-46
membrane SUPERFAMILY cellular component 8.57E-22
cell-cell adhesion PANTHER biological process 1.7E-123