Gene Card
Best human hits
YBX1; YBX2; YBX3
Species
Unique Gene ID
Phmamm.g00005041
Gene Model ID
Phmamm.CG.MTP2014.S189.g05041
Location
S189:183476..191637
Transcript Models and Sequences
AHC0AAA10YN04
Plate: Plate_10_N04
AHC0AAA13YH08
Plate: Plate_13_H08
AHC0AAA19YC02
Plate: Plate_19_C02
AHC0AAA19YO16
Plate: Plate_19_O16
AHC0AAA19YP20
Plate: Plate_19_P20
AHC0AAA3YI19
Plate: Plate_3_I19
AHC0AAA9YA13
Plate: Plate_9_A13
AHC0AAA9YM04
Plate: Plate_9_M04
AHC0AAA28YK06
Plate: Plate_28_K06
AHC0AAA34YE11
Plate: Plate_34_E11
AHC0AAA35YE16
Plate: Plate_35_E16
AHC0AAA36YK04
Plate: Plate_36_K04
AHC0AAA38YF09
Plate: Plate_38_F09
AHC0AAA44YC06
Plate: Plate_44_C06
AHC0AAA46YP19
Plate: Plate_46_P19
AHC0AAA47YD08
Plate: Plate_47_D08
AHC0AAA48YG22
Plate: Plate_48_G22
AHC0AAA49YO18
Plate: Plate_49_O18
AHC0AAA51YN16
Plate: Plate_51_N16
AHC0AAA53YP19
Plate: Plate_53_P19
AHC0AAA59YN03
Plate: Plate_59_N03
AHC0AAA61YL11
Plate: Plate_61_L11
AHC0AAA64YD13
Plate: Plate_64_D13
AHC0AAA65YN19
Plate: Plate_65_N19
AHC0AAA66YN22
Plate: Plate_66_N22
AHC0AAA68YF17
Plate: Plate_68_F17
AHC0AAA70YB21
Plate: Plate_70_B21
AHC0AAA71YM07
Plate: Plate_71_M07
AHC0AAA75YI08
Plate: Plate_75_I08
AHC0AAA77YM18
Plate: Plate_77_M18
AHC0AAA77YP05
Plate: Plate_77_P05
AHC0AAA79YK24
Plate: Plate_79_K24
AHC0AAA103YP21
Plate: Plate_103_P21
AHC0AAA105YJ19
Plate: Plate_105_J19
AHC0AAA106YM18
Plate: Plate_106_M18
AHC0AAA108YG13
Plate: Plate_108_G13
AHC0AAA109YH19
Plate: Plate_109_H19
AHC0AAA110YB21
Plate: Plate_110_B21
AHC0AAA116YP13
Plate: Plate_116_P13
AHC0AAA117YP17
Plate: Plate_117_P17
AHC0AAA119YK04
Plate: Plate_119_K04
AHC0AAA123YA06
Plate: Plate_123_A06
AHC0AAA123YK02
Plate: Plate_123_K02
AHC0AAA127YE02
Plate: Plate_127_E02
AHC0AAA130YJ11
Plate: Plate_130_J11
AHC0AAA133YN03
Plate: Plate_133_N03
AHC0AAA142YH13
Plate: Plate_142_H13
AHC0AAA144YG14
Plate: Plate_144_G14
AHC0AAA145YL17
Plate: Plate_145_L17
AHC0AAA83YD20
Plate: Plate_83_D20
AHC0AAA86YI19
Plate: Plate_86_I19
AHC0AAA88YG09
Plate: Plate_88_G09
AHC0AAA88YJ02
Plate: Plate_88_J02
AHC0AAA90YI24
Plate: Plate_90_I24
AHC0AAA92YI13
Plate: Plate_92_I13
AHC0AAA93YJ23
Plate: Plate_93_J23
AHC0AAA94YH04
Plate: Plate_94_H04
AHC0AAA97YK22
Plate: Plate_97_K22
AHC0AAA99YF05
Plate: Plate_99_F05
AHC0AAA106YO20
Plate: Plate_106_O20
AHC0AAA133YN01
Plate: Plate_133_N01
AHC0AAA161YN19
Plate: Plate_161_N19
AHC0AAA163YA07
Plate: Plate_163_A07
AHC0AAA169YE08
Plate: Plate_169_E08
AHC0AAA170YC14
Plate: Plate_170_C14
AHC0AAA171YM02
Plate: Plate_171_M02
AHC0AAA175YL08
Plate: Plate_175_L08
AHC0AAA177YO10
Plate: Plate_177_O10
AHC0AAA183YD04
Plate: Plate_183_D04
AHC0AAA194YL09
Plate: Plate_194_L09
AHC0AAA198YI07
Plate: Plate_198_I07
AHC0AAA198YN06
Plate: Plate_198_N06
AHC0AAA201YH02
Plate: Plate_201_H02
AHC0AAA206YM02
Plate: Plate_206_M02
AHC0AAA209YI13
Plate: Plate_209_I13
AHC0AAA215YE04
Plate: Plate_215_E04
AHC0AAA215YI07
Plate: Plate_215_I07
AHC0AAA217YF17
Plate: Plate_217_F17
AHC0AAA221YE18
Plate: Plate_221_E18
AHC0AAA221YJ04
Plate: Plate_221_J04
AHC0AAA222YB11
Plate: Plate_222_B11
AHC0AAA223YG07
Plate: Plate_223_G07
AHC0AAA226YE02
Plate: Plate_226_E02
AHC0AAA228YB21
Plate: Plate_228_B21
AHC0AAA230YD22
Plate: Plate_230_D22
AHC0AAA231YB21
Plate: Plate_231_B21
AHC0AAA231YC21
Plate: Plate_231_C21
AHC0AAA235YN01
Plate: Plate_235_N01
AHC0AAA222YN24
Plate: Plate_222_N24
AHC0AAA242YM20
Plate: Plate_242_M20
AHC0AAA240YI12
Plate: Plate_240_I12
AHC0AAA243YC07
Plate: Plate_243_C07
AHC0AAA250YO11
Plate: Plate_250_O11
AHC0AAA259YN08
Plate: Plate_259_N08
AHC0AAA257YF15
Plate: Plate_257_F15
AHC0AAA262YJ12
Plate: Plate_262_J12
AHC0AAA262YL21
Plate: Plate_262_L21
AHC0AAA261YJ17
Plate: Plate_261_J17
AHC0AAA265YJ20
Plate: Plate_265_J20
AHC0AAA263YE18
Plate: Plate_263_E18
AHC0AAA38YH11
Plate: Plate_38_H11
AHC0AAA266YM24
Plate: Plate_266_M24
AHC0AAA92YK15
Plate: Plate_92_K15
n/a
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IPR Term | Analysis | Definition |
---|---|---|
CSP_DNA-bd | CDD | Cold-shock protein, DNA-binding |
CSP_DNA-bd | Pfam | Cold-shock protein, DNA-binding |
CSD | SMART | Cold shock domain |
NA-bd_OB-fold | SUPERFAMILY | Nucleic acid-binding, OB-fold |
CSP_DNA-bd | PRINTS | Cold-shock protein, DNA-binding |
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
---|
GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
---|---|---|---|---|
RNA polymerase II regulatory region sequence-specific DNA binding | Hs | molecular function | 117 | 9.58e-31 |
RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 69.3 | 1.42e-13 |
RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 117 | 9.58e-31 |
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | Hs | molecular function | 69.3 | 1.42e-13 |
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding | Hs | molecular function | 117 | 9.58e-31 |
fibrillar center | Hs | cellular component | 117 | 5.04e-31 |
nucleic acid binding | Hs | molecular function | 117 | 5.04e-31 |
DNA binding | Hs | molecular function | 117 | 5.04e-31 |
chromatin binding | Hs | molecular function | 69.3 | 1.42e-13 |
double-stranded DNA binding | Hs | molecular function | 117 | 9.58e-31 |
single-stranded DNA binding | Hs | molecular function | 117 | 9.58e-31 |
transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 117 | 9.58e-31 |
transcription corepressor activity | Hs | molecular function | 117 | 9.58e-31 |
RNA binding | Hs | molecular function | 117 | 5.04e-31 |
mRNA 3'-UTR binding | Hs | molecular function | 117 | 9.58e-31 |
protein binding | Hs | molecular function | 117 | 9.58e-31 |
extracellular region | Hs | cellular component | 69.3 | 1.42e-13 |
nucleus | Hs | cellular component | 117 | 5.04e-31 |
nucleoplasm | Hs | cellular component | 69.3 | 1.42e-13 |
U12-type spliceosomal complex | Hs | cellular component | 69.3 | 1.42e-13 |
cytoplasm | Hs | cellular component | 117 | 5.04e-31 |
cytosol | Hs | cellular component | 117 | 9.58e-31 |
polysome | Hs | cellular component | 117 | 9.58e-31 |
bicellular tight junction | Hs | cellular component | 117 | 9.58e-31 |
cytoplasmic stress granule | Hs | cellular component | 69.3 | 1.42e-13 |
Rho GTPase binding | Hs | molecular function | 117 | 9.58e-31 |
intracellular ribonucleoprotein complex | Hs | cellular component | 117 | 9.58e-31 |
nuclear membrane | Hs | cellular component | 69.3 | 1.42e-13 |
intracellular membrane-bounded organelle | Hs | cellular component | 69.3 | 1.42e-13 |
perinuclear region of cytoplasm | Hs | cellular component | 117 | 9.58e-31 |
GTPase binding | Hs | molecular function | 69.3 | 1.42e-13 |
extracellular exosome | Hs | cellular component | 69.3 | 1.42e-13 |
CRD-mediated mRNA stability complex | Hs | cellular component | 69.3 | 1.42e-13 |
histone pre-mRNA 3'end processing complex | Hs | cellular component | 69.3 | 1.42e-13 |
GO Term | Analysis | Type | e-value |
---|---|---|---|
nucleic acid binding | Pfam | molecular function | 1.7E-18 |
DNA binding | Pfam | molecular function | 1.7E-18 |
regulation of transcription, DNA-templated | Pfam | biological process | 1.7E-18 |