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GENE CARD

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  1. Gene 'Phfumi.CG.MTP2014.S2...'
  2. Gene 'KH2012:KH.C8.49'
  3. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

CHTOP

Species

P.mammillata

Unique Gene ID

Phmamm.g00004680

Gene Model ID

Phmamm.CG.MTP2014.S171.g04680

Location

S171:155036..156536

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S171.g04680.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

76 results

AHC0AAA10YP10

Plate: Plate_10_P10

AHC0AAA16YO12

Plate: Plate_16_O12

AHC0AAA19YB24

Plate: Plate_19_B24

AHC0AAA19YK12

Plate: Plate_19_K12

AHC0AAA22YM21

Plate: Plate_22_M21

AHC0AAA30YJ23

Plate: Plate_30_J23

AHC0AAA32YK06

Plate: Plate_32_K06

AHC0AAA37YG12

Plate: Plate_37_G12

AHC0AAA39YL12

Plate: Plate_39_L12

AHC0AAA62YJ13

Plate: Plate_62_J13

AHC0AAA63YP13

Plate: Plate_63_P13

AHC0AAA65YD04

Plate: Plate_65_D04

AHC0AAA72YI06

Plate: Plate_72_I06

AHC0AAA72YJ20

Plate: Plate_72_J20

AHC0AAA77YB24

Plate: Plate_77_B24

AHC0AAA79YB07

Plate: Plate_79_B07

AHC0AAA80YL05

Plate: Plate_80_L05

AHC0AAA103YF15

Plate: Plate_103_F15

AHC0AAA104YJ13

Plate: Plate_104_J13

AHC0AAA109YO02

Plate: Plate_109_O02

AHC0AAA111YM09

Plate: Plate_111_M09

AHC0AAA115YI01

Plate: Plate_115_I01

AHC0AAA120YL16

Plate: Plate_120_L16

AHC0AAA121YM19

Plate: Plate_121_M19

AHC0AAA132YF16

Plate: Plate_132_F16

AHC0AAA132YN12

Plate: Plate_132_N12

AHC0AAA134YL24

Plate: Plate_134_L24

AHC0AAA137YJ11

Plate: Plate_137_J11

AHC0AAA138YG04

Plate: Plate_138_G04

AHC0AAA139YC02

Plate: Plate_139_C02

AHC0AAA141YB18

Plate: Plate_141_B18

AHC0AAA143YH22

Plate: Plate_143_H22

AHC0AAA150YC08

Plate: Plate_150_C08

AHC0AAA150YE24

Plate: Plate_150_E24

AHC0AAA150YK07

Plate: Plate_150_K07

AHC0AAA82YB14

Plate: Plate_82_B14

AHC0AAA83YJ17

Plate: Plate_83_J17

AHC0AAA85YJ03

Plate: Plate_85_J03

AHC0AAA89YC22

Plate: Plate_89_C22

AHC0AAA93YA08

Plate: Plate_93_A08

AHC0AAA93YJ16

Plate: Plate_93_J16

AHC0AAA99YC09

Plate: Plate_99_C09

AHC0AAA120YL14

Plate: Plate_120_L14

AHC0AAA162YF15

Plate: Plate_162_F15

AHC0AAA164YB01

Plate: Plate_164_B01

AHC0AAA166YF24

Plate: Plate_166_F24

AHC0AAA166YO20

Plate: Plate_166_O20

AHC0AAA172YH15

Plate: Plate_172_H15

AHC0AAA174YL09

Plate: Plate_174_L09

AHC0AAA175YI13

Plate: Plate_175_I13

AHC0AAA195YM23

Plate: Plate_195_M23

AHC0AAA208YB23

Plate: Plate_208_B23

AHC0AAA208YP06

Plate: Plate_208_P06

AHC0AAA209YK08

Plate: Plate_209_K08

AHC0AAA212YL12

Plate: Plate_212_L12

AHC0AAA213YH04

Plate: Plate_213_H04

AHC0AAA215YH14

Plate: Plate_215_H14

AHC0AAA218YC14

Plate: Plate_218_C14

AHC0AAA220YH17

Plate: Plate_220_H17

AHC0AAA223YI18

Plate: Plate_223_I18

AHC0AAA230YE02

Plate: Plate_230_E02

AHC0AAA230YE22

Plate: Plate_230_E22

AHC0AAA233YF07

Plate: Plate_233_F07

AHC0AAA235YK07

Plate: Plate_235_K07

AHC0AAA236YM23

Plate: Plate_236_M23

AHC0AAA240YB20

Plate: Plate_240_B20

AHC0AAA244YI24

Plate: Plate_244_I24

AHC0AAA250YB13

Plate: Plate_250_B13

AHC0AAA254YD22

Plate: Plate_254_D22

AHC0AAA254YJ06

Plate: Plate_254_J06

AHC0AAA255YO10

Plate: Plate_255_O10

AHC0AAA257YP21

Plate: Plate_257_P21

AHC0AAA262YB18

Plate: Plate_262_B18

AHC0AAA267YG01

Plate: Plate_267_G01

AHC0AAA268YN12

Plate: Plate_268_N12

AHC0AAA39YL10

Plate: Plate_39_L10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
FoP_C SMART Chromatin target of PRMT1 protein, C-terminal
FoP_C Pfam Chromatin target of PRMT1 protein, C-terminal

GOSlim

25 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
positive regulation of cell proliferation Orthology biological process
nuclear speck Orthology cellular component
nuclear part Orthology cellular component
macromolecular complex Orthology cellular component
transcription from RNA polymerase II promoter Orthology biological process
organic substance transport Orthology biological process
intracellular transport Orthology biological process
intracellular protein transport Orthology biological process
gene expression Orthology biological process
sequence-specific DNA binding Orthology molecular function
nucleotide binding Orthology molecular function
organelle organization Orthology biological process
cellular protein modification process Orthology biological process
mRNA processing Orthology biological process
positive regulation of hydrolase activity Orthology biological process
nucleoside-triphosphatase activity Orthology molecular function
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component

GO (Orthology)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
transcription export complex Hs cellular component
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
termination of RNA polymerase II transcription Hs biological process
RNA export from nucleus Hs biological process
mRNA export from nucleus Hs biological process
positive regulation of cell proliferation Hs biological process
methyl-CpG binding Hs molecular function
nuclear speck Hs cellular component
positive regulation of histone methylation Hs biological process
mRNA 3'-end processing Hs biological process
positive regulation of ATPase activity Hs biological process
cytoplasmic ribonucleoprotein granule Hs cellular component
mRNA transport Hs biological process
positive regulation of helicase activity Hs biological process

GO (Blast)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
transcription export complex Hs cellular component 48.9 2.22e-07
RNA binding Hs molecular function 48.9 2.22e-07
protein binding Hs molecular function 48.9 2.22e-07
nucleus Hs cellular component 48.9 2.22e-07
nucleoplasm Hs cellular component 48.9 2.22e-07
nucleolus Hs cellular component 48.9 2.22e-07
methyl-CpG binding Hs molecular function 48.9 2.22e-07
nuclear speck Hs cellular component 48.9 2.22e-07
cytoplasmic ribonucleoprotein granule Hs cellular component 48.9 2.22e-07

GO (InterProScan)

No result

GO Term Analysis Type e-value