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GENE CARD

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Gene Card

Best human hits

FBXO25; FBXO32; FBXO4

Species

P.mammillata

Unique Gene ID

Phmamm.g00004512

Gene Model ID

Phmamm.CG.MTP2014.S162.g04512

Location

S162:101936..113556

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

19 results

AHC0AAA19YJ08

Plate: Plate_19_J08

AHC0AAA30YE06

Plate: Plate_30_E06

AHC0AAA53YH06

Plate: Plate_53_H06

AHC0AAA55YC15

Plate: Plate_55_C15

AHC0AAA60YO04

Plate: Plate_60_O04

AHC0AAA67YG21

Plate: Plate_67_G21

AHC0AAA68YG14

Plate: Plate_68_G14

AHC0AAA117YM22

Plate: Plate_117_M22

AHC0AAA117YN14

Plate: Plate_117_N14

AHC0AAA82YI14

Plate: Plate_82_I14

AHC0AAA84YF05

Plate: Plate_84_F05

AHC0AAA91YM17

Plate: Plate_91_M17

AHC0AAA174YB21

Plate: Plate_174_B21

AHC0AAA188YC05

Plate: Plate_188_C05

AHC0AAA225YF05

Plate: Plate_225_F05

AHC0AAA243YG06

Plate: Plate_243_G06

AHC0AAA253YL20

Plate: Plate_253_L20

AHC0AAA255YD04

Plate: Plate_255_D04

AHC0AAA55YC13

Plate: Plate_55_C13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
F-box_dom ProSiteProfiles F-box domain
F-box-like_dom_sf SUPERFAMILY F-box-like domain superfamily

GOSlim

16 results

GO Term Annotation Origin Type
protein polyubiquitination Orthology biological process
actin binding Orthology molecular function
ubiquitin-protein transferase activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
protein ubiquitination Orthology biological process
protein homodimerization activity Blast molecular function
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
organelle part Orthology cellular component
cytoplasmic part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
cellular protein modification process Orthology biological process

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
ubiquitin ligase complex Hs cellular component
protein polyubiquitination Hs biological process
actin binding Hs molecular function
ubiquitin-protein transferase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
protein ubiquitination Hs biological process
SCF ubiquitin ligase complex Hs cellular component
Z disc Hs cellular component
post-translational protein modification Hs biological process

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ubiquitin ligase complex Hs cellular component 163 5.72e-47
actin binding Hs molecular function 163 5.72e-47
ubiquitin-protein transferase activity Hs molecular function 166 3.53e-48
protein binding Hs molecular function 166 3.53e-48
nucleus Hs cellular component 166 3.53e-48
nucleoplasm Hs cellular component 166 3.53e-48
cytoplasm Hs cellular component 166 3.53e-48
cytosol Hs cellular component 166 3.53e-48
SCF ubiquitin ligase complex Hs cellular component 166 3.53e-48
Z disc Hs cellular component 166 3.53e-48
protein homodimerization activity Hs molecular function 39.3 0.003
ubiquitin protein ligase activity Hs molecular function 39.3 0.003

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding SUPERFAMILY molecular function 9.81E-12