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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

RAB18; RAB2A; RAB2B

Species

P.mammillata

Unique Gene ID

Phmamm.g00003831

Gene Model ID

Phmamm.CG.MTP2014.S129.g03831

Location

S129:78217..79446

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S129.g03831.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

27 results

AHC0AAA14YA22

Plate: Plate_14_A22

AHC0AAA7YO12

Plate: Plate_7_O12

AHC0AAA41YG10

Plate: Plate_41_G10

AHC0AAA41YO06

Plate: Plate_41_O06

AHC0AAA48YH23

Plate: Plate_48_H23

AHC0AAA51YD15

Plate: Plate_51_D15

AHC0AAA52YO13

Plate: Plate_52_O13

AHC0AAA55YG24

Plate: Plate_55_G24

AHC0AAA57YG05

Plate: Plate_57_G05

AHC0AAA79YK06

Plate: Plate_79_K06

AHC0AAA100YE21

Plate: Plate_100_E21

AHC0AAA106YP19

Plate: Plate_106_P19

AHC0AAA115YE16

Plate: Plate_115_E16

AHC0AAA143YF10

Plate: Plate_143_F10

AHC0AAA85YP21

Plate: Plate_85_P21

AHC0AAA88YA07

Plate: Plate_88_A07

AHC0AAA106YP17

Plate: Plate_106_P17

AHC0AAA165YC03

Plate: Plate_165_C03

AHC0AAA168YD01

Plate: Plate_168_D01

AHC0AAA170YG16

Plate: Plate_170_G16

AHC0AAA170YP12

Plate: Plate_170_P12

AHC0AAA185YO24

Plate: Plate_185_O24

AHC0AAA190YI10

Plate: Plate_190_I10

AHC0AAA201YB07

Plate: Plate_201_B07

AHC0AAA205YM23

Plate: Plate_205_M23

AHC0AAA235YN17

Plate: Plate_235_N17

AHC0AAA55YG22

Plate: Plate_55_G22

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Small_GTPase Pfam Small GTPase superfamily
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

36 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
nucleotide binding Orthology molecular function
GTPase activity Orthology molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
intracellular Orthology cellular component
nucleus Blast cellular component
lysosomal membrane Blast cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Orthology cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
small GTPase mediated signal transduction Orthology biological process
multicellular organism development Orthology biological process
brain development Orthology biological process
protein transport Orthology biological process
membrane Orthology cellular component
melanosome Blast cellular component
extracellular exosome Orthology cellular component
animal organ development Orthology biological process
anion binding Orthology molecular function
guanyl ribonucleotide binding Orthology molecular function
purine ribonucleoside binding Orthology molecular function
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
bounding membrane of organelle Orthology cellular component
organelle organization Orthology biological process
intracellular transport Orthology biological process
endoplasmic reticulum part Orthology cellular component
cytoplasmic part Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
synapse part Blast cellular component
neuron part Blast cellular component

GO (Orthology)

22 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nucleotide binding Hs molecular function
eye development Hs biological process
GTPase activity Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
intracellular Hs cellular component
endoplasmic reticulum membrane Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
small GTPase mediated signal transduction Hs biological process
multicellular organism development Hs biological process
brain development Hs biological process
protein transport Hs biological process
membrane Hs cellular component
GDP binding Hs molecular function
secretory granule membrane Hs cellular component
lipid particle organization Hs biological process
nuclear import Hs biological process
extracellular exosome Hs cellular component
endoplasmic reticulum tubular network Hs cellular component
endoplasmic reticulum tubular network organization Hs biological process

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 176 3.22e-56
nucleotide binding Hs molecular function 234 1.00e-77
GTPase activity Hs molecular function 234 1.00e-77
protein binding Hs molecular function 234 1.00e-77
GTP binding Hs molecular function 234 1.00e-77
intracellular Hs cellular component 234 1.00e-77
nucleus Hs cellular component 176 3.22e-56
lysosomal membrane Hs cellular component 176 3.22e-56
endoplasmic reticulum Hs cellular component 176 3.22e-56
endoplasmic reticulum membrane Hs cellular component 234 1.00e-77
Golgi apparatus Hs cellular component 234 1.00e-77
cytosol Hs cellular component 234 1.00e-77
plasma membrane Hs cellular component 234 1.00e-77
membrane Hs cellular component 234 1.00e-77
GDP binding Hs molecular function 234 1.00e-77
secretory granule membrane Hs cellular component 234 1.00e-77
endoplasmic reticulum-Golgi intermediate compartment membrane Hs cellular component 176 3.22e-56
melanosome Hs cellular component 176 3.22e-56
extracellular exosome Hs cellular component 234 1.00e-77
endoplasmic reticulum tubular network Hs cellular component 234 1.00e-77
presynapse Hs cellular component 174 3.90e-55

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 3.6E-57
GTP binding Pfam molecular function 3.6E-57