Aniseed - Gene card

Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

AGPAT4; AGPAT5; MRPL21

Species

P.mammillata

Unique Gene ID

Phmamm.g00003531

Gene Model ID

Phmamm.CG.MTP2014.S116.g03531

Location

S116:77995..85289

Transcript Models and Sequences

Phmamm.CG.MTP2014.S116.g03531.01.t
Phmamm.CG.MTP2014.S116.g03531.02.t
Phmamm.CG.MTP2014.S116.g03531.03.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA194YI02

Plate: Plate_194_I02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
L21p-like	PANTHER	Ribosomal protein L21-like
L21p-like	Pfam	Ribosomal protein L21-like
L21-like_sf	SUPERFAMILY	L21-like superfamily
Plipid/glycerol_acylTrfase	SMART	Phospholipid/glycerol acyltransferase
Plipid/glycerol_acylTrfase	Pfam	Phospholipid/glycerol acyltransferase

GOSlim

19 results

GO Term	Annotation Origin	Type
RNA binding	Orthology	molecular function
structural constituent of ribosome	Orthology	molecular function
protein binding	Blast	molecular function
intracellular	Orthology	cellular component
nucleus	Blast	cellular component
nuclear envelope	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
ribosome	Orthology	cellular component
metabolic process	InterProScan	biological process
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
transferase activity	Blast	molecular function
mitochondrial matrix	Orthology	cellular component
whole membrane	Blast	cellular component
mitochondrial membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA binding	Hs	molecular function
structural constituent of ribosome	Hs	molecular function
intracellular	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial large ribosomal subunit	Hs	cellular component
ribosome	Hs	cellular component
translation	Hs	biological process
intracellular ribonucleoprotein complex	Hs	cellular component
mitochondrial translational elongation	Hs	biological process
mitochondrial translational termination	Hs	biological process

GO (Blast)