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Gene Card

Best human hits

SYT1; SYT2; SYT5

Species

P.mammillata

Unique Gene ID

Phmamm.g00003312

Gene Model ID

Phmamm.CG.MTP2014.S105.g03312

Location

S105:242519..248736

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S105.g03312.01.t
Phmamm.CG.MTP2014.S105.g03312.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

19 results

AHC0AAA12YE20

Plate: Plate_12_E20

AHC0AAA23YM16

Plate: Plate_23_M16

AHC0AAA24YB05

Plate: Plate_24_B05

AHC0AAA67YH06

Plate: Plate_67_H06

AHC0AAA67YI14

Plate: Plate_67_I14

AHC0AAA117YE07

Plate: Plate_117_E07

AHC0AAA141YJ13

Plate: Plate_141_J13

AHC0AAA147YF09

Plate: Plate_147_F09

AHC0AAA87YL01

Plate: Plate_87_L01

AHC0AAA147YH11

Plate: Plate_147_H11

AHC0AAA159YB02

Plate: Plate_159_B02

AHC0AAA162YE07

Plate: Plate_162_E07

AHC0AAA162YM23

Plate: Plate_162_M23

AHC0AAA184YE06

Plate: Plate_184_E06

AHC0AAA186YE16

Plate: Plate_186_E16

AHC0AAA228YK18

Plate: Plate_228_K18

AHC0AAA250YH12

Plate: Plate_250_H12

AHC0AAA265YB07

Plate: Plate_265_B07

AHC0AAA266YH08

Plate: Plate_266_H08

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
C2_domain_sf Gene3D C2 domain superfamily
C2_dom SMART C2 domain
C2_dom ProSiteProfiles C2 domain
C2_dom Pfam C2 domain
Synaptotagmin PRINTS Synaptotagmin
C2_dom PRINTS C2 domain
Synaptotagmin1/2 PANTHER Synaptotagmin 1/2

GOSlim

50 results

GO Term Annotation Origin Type
calcium ion binding Orthology molecular function
protein binding Orthology molecular function
calmodulin binding Orthology molecular function
cytoplasm Orthology cellular component
endosome Orthology cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
chemical synaptic transmission Orthology biological process
brain development Orthology biological process
protein C-terminus binding Orthology molecular function
membrane Orthology cellular component
integral component of membrane Orthology cellular component
cell junction Orthology cellular component
cell differentiation Orthology biological process
axon Orthology cellular component
cytoplasmic vesicle Orthology cellular component
identical protein binding Orthology molecular function
neuron projection Orthology cellular component
neuronal cell body Orthology cellular component
intracellular organelle Orthology cellular component
synapse Orthology cellular component
metal ion binding Orthology molecular function
protein heterodimerization activity Orthology molecular function
perinuclear region of cytoplasm Orthology cellular component
protein homooligomerization Orthology biological process
membrane organization Orthology biological process
anion binding Orthology molecular function
organelle organization Orthology biological process
synapse part Orthology cellular component
neuron part Orthology cellular component
endomembrane system Orthology cellular component
organic substance transport Orthology biological process
cellular process Orthology biological process
ion transport Orthology biological process
cation transport Orthology biological process
intracellular transport Orthology biological process
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
intracellular organelle part Orthology cellular component
cytoplasmic part Orthology cellular component
membrane part Orthology cellular component
macromolecular complex Orthology cellular component
synaptic membrane Orthology cellular component
cell projection part Orthology cellular component
small molecule binding Orthology molecular function
receptor binding Orthology molecular function
protein oligomerization Orthology biological process
regulation of signaling Orthology biological process
neuron projection morphogenesis Orthology biological process

GO (Orthology)

78 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
SNARE binding Hs molecular function
phosphatidylserine binding Hs molecular function
calcium ion binding Hs molecular function
detection of calcium ion Hs biological process
protein binding Hs molecular function
calmodulin binding Hs molecular function
phospholipid binding Hs molecular function
calcium-dependent phospholipid binding Hs molecular function
1-phosphatidylinositol binding Hs molecular function
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function
cytoplasm Hs cellular component
endosome Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
vesicle fusion Hs biological process
chemical synaptic transmission Hs biological process
neurotransmitter secretion Hs biological process
brain development Hs biological process
synaptic vesicle Hs cellular component
protein C-terminus binding Hs molecular function
glutamate secretion Hs biological process
regulation of dopamine secretion Hs biological process
membrane Hs cellular component
integral component of membrane Hs cellular component
synaptic vesicle exocytosis Hs biological process
syntaxin-1 binding Hs molecular function
regulation of exocytosis Hs biological process
regulation of calcium ion-dependent exocytosis Hs biological process
syntaxin binding Hs molecular function
cell junction Hs cellular component
secretory granule Hs cellular component
cell differentiation Hs biological process
clathrin binding Hs molecular function
integral component of synaptic vesicle membrane Hs cellular component
syntaxin-3 binding Hs molecular function
axon Hs cellular component
transport vesicle membrane Hs cellular component
clathrin-coated vesicle membrane Hs cellular component
synaptic vesicle membrane Hs cellular component
dense core granule Hs cellular component
SNARE complex Hs cellular component
positive regulation of vesicle fusion Hs biological process
cytoplasmic vesicle Hs cellular component
chromaffin granule membrane Hs cellular component
presynaptic membrane Hs cellular component
identical protein binding Hs molecular function
neuron projection Hs cellular component
neuronal cell body Hs cellular component
terminal bouton Hs cellular component
intracellular organelle Hs cellular component
inositol 1,3,4,5 tetrakisphosphate binding Hs molecular function
neuron projection terminus Hs cellular component
synapse Hs cellular component
positive regulation of calcium ion-dependent exocytosis Hs biological process
metal ion binding Hs molecular function
protein heterodimerization activity Hs molecular function
vesicle docking Hs biological process
calcium-dependent protein binding Hs molecular function
perinuclear region of cytoplasm Hs cellular component
synaptic vesicle endocytosis Hs biological process
calcium ion-regulated exocytosis of neurotransmitter Hs biological process
low-density lipoprotein particle receptor binding Hs molecular function
positive regulation of synaptic transmission Hs biological process
protein homooligomerization Hs biological process
protein heterooligomerization Hs biological process
response to calcium ion Hs biological process
regulation of synaptic transmission, glutamatergic Hs biological process
recycling endosome membrane Hs cellular component
excitatory synapse Hs cellular component
clathrin-sculpted acetylcholine transport vesicle membrane Hs cellular component
clathrin-sculpted glutamate transport vesicle membrane Hs cellular component
membrane organization Hs biological process
clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane Hs cellular component
clathrin-sculpted monoamine transport vesicle membrane Hs cellular component
cellular response to calcium ion Hs biological process
positive regulation of dendrite extension Hs biological process
proximal neuron projection Hs cellular component

GO (Blast)

54 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
SNARE binding Hs molecular function 400 2.60e-138
phosphatidylserine binding Hs molecular function 400 2.60e-138
calcium ion binding Hs molecular function 400 2.60e-138
protein binding Hs molecular function 400 2.60e-138
calmodulin binding Hs molecular function 400 2.60e-138
phospholipid binding Hs molecular function 400 2.60e-138
calcium-dependent phospholipid binding Hs molecular function 400 2.60e-138
1-phosphatidylinositol binding Hs molecular function 400 2.60e-138
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function 400 2.60e-138
cytoplasm Hs cellular component 400 2.60e-138
endosome Hs cellular component 348 2.39e-118
Golgi apparatus Hs cellular component 400 2.60e-138
cytosol Hs cellular component 400 2.60e-138
plasma membrane Hs cellular component 400 2.60e-138
synaptic vesicle Hs cellular component 400 2.60e-138
protein C-terminus binding Hs molecular function 400 2.60e-138
membrane Hs cellular component 400 2.60e-138
integral component of membrane Hs cellular component 400 2.60e-138
syntaxin-1 binding Hs molecular function 400 2.60e-138
syntaxin binding Hs molecular function 400 2.60e-138
cell junction Hs cellular component 400 2.60e-138
secretory granule Hs cellular component 400 2.60e-138
clathrin binding Hs molecular function 400 2.60e-138
integral component of synaptic vesicle membrane Hs cellular component 400 2.60e-138
syntaxin-3 binding Hs molecular function 400 2.60e-138
axon Hs cellular component 400 2.60e-138
transport vesicle membrane Hs cellular component 400 2.60e-138
clathrin-coated vesicle membrane Hs cellular component 400 2.60e-138
synaptic vesicle membrane Hs cellular component 400 2.60e-138
dense core granule Hs cellular component 400 2.60e-138
SNARE complex Hs cellular component 400 2.60e-138
cytoplasmic vesicle Hs cellular component 400 2.60e-138
chromaffin granule membrane Hs cellular component 400 2.60e-138
presynaptic membrane Hs cellular component 400 2.60e-138
identical protein binding Hs molecular function 400 2.60e-138
neuron projection Hs cellular component 400 2.60e-138
neuronal cell body Hs cellular component 348 2.39e-118
terminal bouton Hs cellular component 400 2.60e-138
intracellular organelle Hs cellular component 400 2.60e-138
inositol 1,3,4,5 tetrakisphosphate binding Hs molecular function 386 6.66e-133
neuron projection terminus Hs cellular component 400 2.60e-138
synapse Hs cellular component 400 2.60e-138
metal ion binding Hs molecular function 400 2.60e-138
protein heterodimerization activity Hs molecular function 400 2.60e-138
calcium-dependent protein binding Hs molecular function 400 2.60e-138
perinuclear region of cytoplasm Hs cellular component 348 2.39e-118
low-density lipoprotein particle receptor binding Hs molecular function 400 2.60e-138
recycling endosome membrane Hs cellular component 348 2.39e-118
excitatory synapse Hs cellular component 400 2.60e-138
clathrin-sculpted acetylcholine transport vesicle membrane Hs cellular component 400 2.60e-138
clathrin-sculpted glutamate transport vesicle membrane Hs cellular component 400 2.60e-138
clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane Hs cellular component 400 2.60e-138
clathrin-sculpted monoamine transport vesicle membrane Hs cellular component 400 2.60e-138
proximal neuron projection Hs cellular component 348 2.39e-118

GO (InterProScan)

4 results

GO Term Analysis Type e-value
calcium-dependent phospholipid binding PANTHER molecular function 2.8E-179
neurotransmitter secretion PANTHER biological process 2.8E-179
synaptic vesicle PANTHER cellular component 2.8E-179
membrane PRINTS cellular component 1.3E-19

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