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GENE CARD

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Gene Card

Best human hits

TMF1

Species

P.mammillata

Unique Gene ID

Phmamm.g00003200

Gene Model ID

Phmamm.CG.MTP2014.S101.g03200

Location

S101:79233..97236

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

21 results

AHC0AAA30YA12

Plate: Plate_30_A12

AHC0AAA37YA06

Plate: Plate_37_A06

AHC0AAA42YB09

Plate: Plate_42_B09

AHC0AAA50YB09

Plate: Plate_50_B09

AHC0AAA74YD08

Plate: Plate_74_D08

AHC0AAA75YI13

Plate: Plate_75_I13

AHC0AAA100YD02

Plate: Plate_100_D02

AHC0AAA100YF20

Plate: Plate_100_F20

AHC0AAA106YK23

Plate: Plate_106_K23

AHC0AAA107YC04

Plate: Plate_107_C04

AHC0AAA112YP05

Plate: Plate_112_P05

AHC0AAA145YE09

Plate: Plate_145_E09

AHC0AAA154YF17

Plate: Plate_154_F17

AHC0AAA84YC13

Plate: Plate_84_C13

AHC0AAA92YG08

Plate: Plate_92_G08

AHC0AAA167YG24

Plate: Plate_167_G24

AHC0AAA190YO20

Plate: Plate_190_O20

AHC0AAA261YE20

Plate: Plate_261_E20

AHC0AAA268YC08

Plate: Plate_268_C08

AHC0AAA268YM11

Plate: Plate_268_M11

AHC0AAA92YG06

Plate: Plate_92_G06

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
TMF_TATA-bd Pfam TATA element modulatory factor 1 TATA binding
TMF_DNA-bd Pfam TATA element modulatory factor 1 DNA binding

GOSlim

26 results

GO Term Annotation Origin Type
Golgi membrane Orthology cellular component
DNA binding Orthology molecular function
transcription cofactor activity Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
endoplasmic reticulum Orthology cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
transcription from RNA polymerase II promoter Orthology biological process
negative regulation of gene expression Orthology biological process
membrane Orthology cellular component
negative regulation of apoptotic process Orthology biological process
spermatogenesis Orthology biological process
cell development Orthology biological process
organelle organization Orthology biological process
reproductive process Orthology biological process
animal organ development Orthology biological process
cell motility Orthology biological process
response to bacterium Orthology biological process
defense response Orthology biological process
regulation of cellular metabolic process Orthology biological process
proteolysis Orthology biological process
cellular response to organic substance Orthology biological process

GO (Orthology)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
Golgi membrane Hs cellular component
acrosome assembly Hs biological process
positive regulation of cytokine production Hs biological process
DNA binding Hs molecular function
transcription cofactor activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
spermatid development Hs biological process
spermatid nucleus differentiation Hs biological process
male gonad development Hs biological process
negative regulation of gene expression Hs biological process
membrane Hs cellular component
flagellated sperm motility Hs biological process
defense response to bacterium Hs biological process
negative regulation of apoptotic process Hs biological process
regulation of proteasomal protein catabolic process Hs biological process
cellular response to organic cyclic compound Hs biological process

GO (Blast)

10 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
Golgi membrane Hs cellular component 356 3.75e-105
DNA binding Hs molecular function 356 3.75e-105
transcription cofactor activity Hs molecular function 356 3.75e-105
protein binding Hs molecular function 356 3.75e-105
nucleus Hs cellular component 356 3.75e-105
cytoplasm Hs cellular component 356 3.75e-105
endoplasmic reticulum Hs cellular component 356 3.75e-105
Golgi apparatus Hs cellular component 356 3.75e-105
cytosol Hs cellular component 356 3.75e-105
membrane Hs cellular component 356 3.75e-105

GO (InterProScan)

No result

GO Term Analysis Type e-value