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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S9...'

Gene Card

Best human hits

CDC6; ORC1

Species

P.mammillata

Unique Gene ID

Phmamm.g00003107

Gene Model ID

Phmamm.CG.MTP2014.S97.g03107

Location

S97:107930..121272

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S97.g03107.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

18 results

AHC0AAA22YB14

Plate: Plate_22_B14

AHC0AAA48YP11

Plate: Plate_48_P11

AHC0AAA119YM08

Plate: Plate_119_M08

AHC0AAA127YB04

Plate: Plate_127_B04

AHC0AAA135YA09

Plate: Plate_135_A09

AHC0AAA137YB14

Plate: Plate_137_B14

AHC0AAA90YH05

Plate: Plate_90_H05

AHC0AAA91YJ12

Plate: Plate_91_J12

AHC0AAA166YL24

Plate: Plate_166_L24

AHC0AAA168YK01

Plate: Plate_168_K01

AHC0AAA171YD05

Plate: Plate_171_D05

AHC0AAA176YG07

Plate: Plate_176_G07

AHC0AAA176YK21

Plate: Plate_176_K21

AHC0AAA190YF06

Plate: Plate_190_F06

AHC0AAA198YA22

Plate: Plate_198_A22

AHC0AAA200YD05

Plate: Plate_200_D05

AHC0AAA235YC18

Plate: Plate_235_C18

AHC0AAA255YM07

Plate: Plate_255_M07

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
Cdc6_C Pfam Cdc6, C-terminal
ORC1 PANTHER Origin recognition complex, subunit 1
WH_DNA-bd_sf SUPERFAMILY Winged helix DNA-binding domain superfamily
BAH_dom ProSiteProfiles Bromo adjacent homology (BAH) domain
Cdc6_C CDD Cdc6, C-terminal
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Cdc6_C SMART Cdc6, C-terminal
ATPase_AAA_core Pfam ATPase, AAA-type, core
AAA+_ATPase SMART AAA+ ATPase domain

GOSlim

20 results

GO Term Annotation Origin Type
G1/S transition of mitotic cell cycle Orthology biological process
nucleotide binding Orthology molecular function
DNA binding Orthology molecular function
chromatin binding Orthology molecular function
protein binding Orthology molecular function
ATP binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
nucleolus Orthology cellular component
cytoplasm Blast cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
DNA replication Orthology biological process
kinase binding Blast molecular function
intracellular non-membrane-bounded organelle Orthology cellular component
nuclear lumen Orthology cellular component
intracellular organelle part Orthology cellular component
macromolecular complex Orthology cellular component
cytoskeletal part Blast cellular component
microtubule cytoskeleton Blast cellular component

GO (Orthology)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
G1/S transition of mitotic cell cycle Hs biological process
nucleotide binding Hs molecular function
nuclear chromosome, telomeric region Hs cellular component
origin recognition complex Hs cellular component
DNA binding Hs molecular function
chromatin binding Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nuclear origin of replication recognition complex Hs cellular component
nucleolus Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
DNA replication Hs biological process
DNA replication initiation Hs biological process

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 470 1.49e-151
nuclear chromosome, telomeric region Hs cellular component 470 1.49e-151
origin recognition complex Hs cellular component 470 1.49e-151
spindle pole Hs cellular component 162 6.04e-42
DNA binding Hs molecular function 470 1.49e-151
chromatin binding Hs molecular function 470 1.49e-151
protein binding Hs molecular function 470 1.49e-151
ATP binding Hs molecular function 470 1.49e-151
nucleus Hs cellular component 470 1.49e-151
nucleoplasm Hs cellular component 470 1.49e-151
nuclear origin of replication recognition complex Hs cellular component 470 1.49e-151
nucleolus Hs cellular component 470 1.49e-151
cytoplasm Hs cellular component 162 6.04e-42
cytosol Hs cellular component 470 1.49e-151
plasma membrane Hs cellular component 470 1.49e-151
kinase binding Hs molecular function 162 6.04e-42
spindle midzone Hs cellular component 162 6.04e-42

GO (InterProScan)

2 results

GO Term Analysis Type e-value
chromatin binding ProSiteProfiles molecular function 12.597
ATP binding Pfam molecular function 9.1E-16