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GENE CARD

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  1. Gene 'Boleac.CG.SB_v3.S357...'
  2. Gene 'Boleac.CG.SB_v3.S245...'

Gene Card

Best human hits

MTF2; PHF1; PHF19

Species

P.mammillata

Unique Gene ID

Phmamm.g00001964

Gene Model ID

Phmamm.CG.MTP2014.S53.g01964

Location

S53:170472..178152

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

25 results

AHC0AAA17YH21

Plate: Plate_17_H21

AHC0AAA4YH21

Plate: Plate_4_H21

AHC0AAA6YE03

Plate: Plate_6_E03

AHC0AAA59YF07

Plate: Plate_59_F07

AHC0AAA63YH03

Plate: Plate_63_H03

AHC0AAA65YM16

Plate: Plate_65_M16

AHC0AAA108YJ06

Plate: Plate_108_J06

AHC0AAA116YH12

Plate: Plate_116_H12

AHC0AAA141YK11

Plate: Plate_141_K11

AHC0AAA144YE08

Plate: Plate_144_E08

AHC0AAA148YF20

Plate: Plate_148_F20

AHC0AAA152YF06

Plate: Plate_152_F06

AHC0AAA83YJ13

Plate: Plate_83_J13

AHC0AAA96YP10

Plate: Plate_96_P10

AHC0AAA160YE01

Plate: Plate_160_E01

AHC0AAA162YD23

Plate: Plate_162_D23

AHC0AAA180YN03

Plate: Plate_180_N03

AHC0AAA186YB03

Plate: Plate_186_B03

AHC0AAA194YI20

Plate: Plate_194_I20

AHC0AAA217YF01

Plate: Plate_217_F01

AHC0AAA219YA04

Plate: Plate_219_A04

AHC0AAA230YA04

Plate: Plate_230_A04

AHC0AAA241YK03

Plate: Plate_241_K03

AHC0AAA241YM16

Plate: Plate_241_M16

AHC0AAA251YA07

Plate: Plate_251_A07

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Tudor SMART Tudor domain
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_PHD-finger Pfam Zinc finger, PHD-finger
Znf_FYVE_PHD SUPERFAMILY Zinc finger, FYVE/PHD-type
Znf_PHD SMART Zinc finger, PHD-type
Znf_PHD-finger ProSiteProfiles Zinc finger, PHD-finger
Zinc_finger_PHD-type_CS ProSitePatterns Zinc finger, PHD-type, conserved site
Mtf2_C_dom Pfam Polycomb-like MTF2 factor 2, C-terminal domain

GOSlim

29 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
RNA polymerase II regulatory region sequence-specific DNA binding Orthology molecular function
DNA binding Orthology molecular function
chromatin binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
centrosome Orthology cellular component
microtubule organizing center Orthology cellular component
cytoskeleton Orthology cellular component
focal adhesion Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
metal ion binding Orthology molecular function
organelle organization Orthology biological process
multicellular organism development Orthology biological process
developmental process Orthology biological process
regulation of cellular metabolic process Orthology biological process
cellular protein modification process Orthology biological process
nucleoplasm part Orthology cellular component
macromolecular complex Orthology cellular component
intracellular organelle part Orthology cellular component
intracellular non-membrane-bounded organelle Orthology cellular component
negative regulation of gene expression Orthology biological process
cell differentiation Orthology biological process

GO (Orthology)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
DNA binding Hs molecular function
chromatin binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
centrosome Hs cellular component
microtubule organizing center Hs cellular component
cytoskeleton Hs cellular component
focal adhesion Hs cellular component
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
cellular response to DNA damage stimulus Hs biological process
segment specification Hs biological process
stem cell population maintenance Hs biological process
regulation of histone methylation Hs biological process
methylated histone binding Hs molecular function
ESC/E(Z) complex Hs cellular component
site of double-strand break Hs cellular component
negative regulation of gene expression, epigenetic Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
stem cell differentiation Hs biological process
negative regulation of histone H3-K27 methylation Hs biological process

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 377 6.01e-122
DNA binding Hs molecular function 377 6.01e-122
chromatin binding Hs molecular function 299 1.96e-92
transcription factor activity, sequence-specific DNA binding Hs molecular function 299 1.96e-92
protein binding Hs molecular function 324 1.49e-101
nucleus Hs cellular component 377 6.01e-122
nucleoplasm Hs cellular component 377 6.01e-122
cytoplasm Hs cellular component 377 6.01e-122
centrosome Hs cellular component 299 1.96e-92
microtubule organizing center Hs cellular component 299 1.96e-92
cytoskeleton Hs cellular component 299 1.96e-92
focal adhesion Hs cellular component 377 6.01e-122
methylated histone binding Hs molecular function 377 6.01e-122
ESC/E(Z) complex Hs cellular component 377 6.01e-122
site of double-strand break Hs cellular component 299 1.96e-92
metal ion binding Hs molecular function 377 6.01e-122

GO (InterProScan)

No result

GO Term Analysis Type e-value