Aniseed - Gene card

Gene 'Phmamm.CG.MTP2014.S3...'

Gene Card

Best human hits

TNR; TNXB

Species

P.mammillata

Unique Gene ID

Phmamm.g00001196

Gene Model ID

Phmamm.CG.MTP2014.S30.g01196

Location

S30:21460..24212

Transcript Models and Sequences

Phmamm.CG.MTP2014.S30.g01196.01.t
Phmamm.CG.MTP2014.S30.g01196.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

130 results

AHC0AAA38YF21

Plate: Plate_38_F21

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

No result

IPR Term	Analysis	Definition

GOSlim

12 results

GO Term	Annotation Origin	Type
integrin binding	Blast	molecular function
protein binding	Blast	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
intracellular	Blast	cellular component
cell surface	Blast	cellular component
membrane raft	Blast	cellular component
extracellular exosome	Blast	cellular component
extracellular region part	Blast	cellular component
macromolecular complex	Blast	cellular component
anion binding	Blast	molecular function
carbohydrate derivative binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
integrin binding	Hs	molecular function	38.1	0.002
protein binding	Hs	molecular function	40.4	2.64e-04
extracellular region	Hs	cellular component	40.4	2.64e-04
proteinaceous extracellular matrix	Hs	cellular component	40.4	2.64e-04
fibrillar collagen trimer	Hs	cellular component	38.1	0.002
extracellular space	Hs	cellular component	38.1	0.002
intracellular	Hs	cellular component	38.1	0.002
heparin binding	Hs	molecular function	38.1	0.002
cell surface	Hs	cellular component	40.4	2.64e-04
extracellular matrix	Hs	cellular component	38.1	0.002
membrane raft	Hs	cellular component	40.4	2.64e-04
extracellular exosome	Hs	cellular component	38.1	0.002
perineuronal net	Hs	cellular component	40.4	2.64e-04

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value