Aniseed - Gene card

Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

MARCH1; MARCH10; MARCH7

Species

P.mammillata

Unique Gene ID

Phmamm.g00000086

Gene Model ID

Phmamm.CG.MTP2014.S2.g00086

Location

S2:299860..301796

Transcript Models and Sequences

Phmamm.CG.MTP2014.S2.g00086.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Znf_RING-CH	ProSiteProfiles	Zinc finger, RING-CH-type
MARCH-like	PANTHER	E3 ubiquitin-protein ligase MARCH-like
Znf_RING-CH	SMART	Zinc finger, RING-CH-type
Znf_RING-CH	Pfam	Zinc finger, RING-CH-type
Znf_RING/FYVE/PHD	Gene3D	Zinc finger, RING/FYVE/PHD-type

GOSlim

21 results

GO Term	Annotation Origin	Type
ubiquitin-protein transferase activity	Blast	molecular function
protein binding	Blast	molecular function
lysosome	Blast	cellular component
lysosomal membrane	Blast	cellular component
endosome	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
Golgi apparatus	Blast	cellular component
plasma membrane	Blast	cellular component
zinc ion binding	Blast	molecular function
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
transferase activity	Blast	molecular function
cytoplasmic vesicle	Blast	cellular component
metal ion binding	Blast	molecular function
intracellular organelle part	Blast	cellular component
organelle membrane	Blast	cellular component
whole membrane	Blast	cellular component
early endosome	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
Golgi membrane	Blast	cellular component
receptor binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
ubiquitin-protein transferase activity	Hs	molecular function	58.5	2.01e-10
protein binding	Hs	molecular function	69.7	3.37e-14
lysosome	Hs	cellular component	58.5	2.01e-10
lysosomal membrane	Hs	cellular component	58.5	2.01e-10
endosome	Hs	cellular component	58.5	2.01e-10
endoplasmic reticulum membrane	Hs	cellular component	58.5	2.01e-10
Golgi apparatus	Hs	cellular component	58.5	2.01e-10
plasma membrane	Hs	cellular component	58.5	2.01e-10
zinc ion binding	Hs	molecular function	73.2	2.13e-15
membrane	Hs	cellular component	58.5	2.01e-10
integral component of membrane	Hs	cellular component	58.5	2.01e-10
transferase activity	Hs	molecular function	73.2	2.13e-15
cytoplasmic vesicle membrane	Hs	cellular component	58.5	2.01e-10
cytoplasmic vesicle	Hs	cellular component	58.5	2.01e-10
early endosome membrane	Hs	cellular component	58.5	2.01e-10
late endosome membrane	Hs	cellular component	58.5	2.01e-10
trans-Golgi network membrane	Hs	cellular component	58.5	2.01e-10
MHC protein binding	Hs	molecular function	58.5	2.01e-10
metal ion binding	Hs	molecular function	73.2	2.13e-15
ubiquitin protein ligase activity	Hs	molecular function	58.5	2.01e-10

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
zinc ion binding	SMART	molecular function	2.1E-15