Login
Help

GENE CARD

Submit your Data

  1. Gene 'Phmamm.CG.MTP2014.S2...'

Gene Card

Best human hits

NOM1

Species

P.mammillata

Unique Gene ID

Phmamm.g00000079

Gene Model ID

Phmamm.CG.MTP2014.S2.g00079

Location

S2:240798..244961

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S2.g00079.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
MIF4G-like_typ-3 SMART MIF4G-like, type 3
MIF4G-like_typ-3 Pfam MIF4G-like, type 3
MIF4-like_sf Gene3D MIF4G-like domain superfamily
ARM-type_fold SUPERFAMILY Armadillo-type fold

GOSlim

6 results

GO Term Annotation Origin Type
RNA binding Orthology molecular function
binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleolus Orthology cellular component
neurogenesis Orthology biological process

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA binding Hs molecular function
binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
neurogenesis Hs biological process
ribosomal small subunit biogenesis Hs biological process

GO (Blast)

5 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 285 8.38e-86
binding Hs molecular function 285 8.38e-86
protein binding Hs molecular function 285 8.38e-86
nucleus Hs cellular component 285 8.38e-86
nucleolus Hs cellular component 285 8.38e-86

GO (InterProScan)

3 results

GO Term Analysis Type e-value
RNA binding SMART molecular function 1.4E-13
binding SUPERFAMILY molecular function 1.01E-19
protein binding SMART molecular function 1.4E-13