Aniseed - Gene card

Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

NT5C3A; NT5C3B

Species

P.mammillata

Unique Gene ID

Phmamm.g00000033

Gene Model ID

Phmamm.CG.MTP2014.S1.g00033

Location

S1:383621..388366

Transcript Models and Sequences

Phmamm.CG.MTP2014.S1.g00033.01.t
Phmamm.CG.MTP2014.S1.g00033.02.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

1 result

AHC0AAA255YH18

Plate: Plate_255_H18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Pyrimidine_nucleotidase_eu	Pfam	Pyrimidine 5'-nucleotidase, eukaryotic
HAD-like_sf	SUPERFAMILY	HAD-like superfamily
Pyrimidine_nucleotidase_eu	TIGRFAM	Pyrimidine 5'-nucleotidase, eukaryotic
Pyrimidine_nucleotidase_eu	SFLD	Pyrimidine 5'-nucleotidase, eukaryotic
HAD_sf	Gene3D	HAD superfamily

GOSlim

17 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
magnesium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
cytosol	Orthology	cellular component
dephosphorylation	Orthology	biological process
transferase activity	Orthology	molecular function
hydrolase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
phosphotransferase activity, alcohol group as acceptor	Orthology	molecular function
phosphate-containing compound metabolic process	Orthology	biological process
nucleobase-containing compound metabolic process	Orthology	biological process
nuclear-transcribed mRNA catabolic process	Orthology	biological process
immune system process	Orthology	biological process
defense response	Orthology	biological process

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
tRNA 2'-phosphotransferase activity	Hs	molecular function
magnesium ion binding	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
cytosol	Hs	cellular component
5'-nucleotidase activity	Hs	molecular function
nucleotide metabolic process	Hs	biological process
dephosphorylation	Hs	biological process
transferase activity	Hs	molecular function
hydrolase activity	Hs	molecular function
exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay	Hs	biological process
metal ion binding	Hs	molecular function
defense response to virus	Hs	biological process

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleotide binding	Hs	molecular function	312	2.29e-106
tRNA 2'-phosphotransferase activity	Hs	molecular function	312	2.29e-106
magnesium ion binding	Hs	molecular function	312	2.29e-106
protein binding	Hs	molecular function	279	4.96e-94
cytoplasm	Hs	cellular component	312	2.29e-106
mitochondrion	Hs	cellular component	312	2.29e-106
endoplasmic reticulum	Hs	cellular component	312	2.29e-106
cytosol	Hs	cellular component	312	2.29e-106
5'-nucleotidase activity	Hs	molecular function	312	2.29e-106
transferase activity	Hs	molecular function	312	2.29e-106
hydrolase activity	Hs	molecular function	312	2.29e-106
metal ion binding	Hs	molecular function	312	2.29e-106

GO (InterProScan)

3 results

GO Term	Analysis	Type
magnesium ion binding	SFLD	molecular function
cytoplasm	SFLD	cellular component
5'-nucleotidase activity	SFLD	molecular function