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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

ARMC3; ARMC4; KPNA2

Species

P.mammillata

Unique Gene ID

Phmamm.g00000024

Gene Model ID

Phmamm.CG.MTP2014.S1.g00024

Location

S1:269504..281985

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1.g00024.01.t

External Database Gene Card

External database links

No result

Collections

Genoscope Yasuo Villefranche

4 results

AHC0AAA106YE24

Plate: Plate_106_E24

AHC0AAA91YP14

Plate: Plate_91_P14

AHC0AAA94YM03

Plate: Plate_94_M03

AHC0AAA106YE22

Plate: Plate_106_E22

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
ARM-type_fold SUPERFAMILY Armadillo-type fold
Armadillo ProSiteProfiles Armadillo
ARM-like Gene3D Armadillo-like helical
Armadillo SMART Armadillo
Armadillo Pfam Armadillo

GOSlim

27 results

GO Term Annotation Origin Type
RNA binding Blast molecular function
binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
cytosol Blast cellular component
cytoskeleton Orthology cellular component
heart development Orthology biological process
protein transport Blast biological process
membrane Blast cellular component
cell projection organization Orthology biological process
cell projection Orthology cellular component
extracellular exosome Blast cellular component
microtubule-based movement Orthology biological process
organelle Orthology cellular component
plasma membrane region Orthology cellular component
macromolecular complex Orthology cellular component
cell projection part Orthology cellular component
microtubule Orthology cellular component
cytoplasmic part Orthology cellular component
multicellular organism development Orthology biological process
brain development Orthology biological process
organelle part Orthology cellular component
nuclear envelope Blast cellular component
enzyme binding Blast molecular function
intracellular transport Blast biological process

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
cilium movement Hs biological process
binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytoskeleton Hs cellular component
cilium Hs cellular component
axoneme Hs cellular component
determination of left/right symmetry Hs biological process
heart development Hs biological process
ventricular system development Hs biological process
cell projection organization Hs biological process
outer dynein arm assembly Hs biological process
cell projection Hs cellular component
ciliary base Hs cellular component

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 72.4 5.70e-13
binding Hs molecular function 1153 0.0
protein binding Hs molecular function 1153 0.0
nucleus Hs cellular component 1153 0.0
nuclear pore Hs cellular component 72.4 5.70e-13
nucleoplasm Hs cellular component 72.4 5.70e-13
cytoplasm Hs cellular component 1153 0.0
cytosol Hs cellular component 72.4 5.70e-13
cytoskeleton Hs cellular component 1153 0.0
cilium Hs cellular component 1153 0.0
axoneme Hs cellular component 1153 0.0
nuclear localization sequence binding Hs molecular function 72.4 5.70e-13
protein transporter activity Hs molecular function 72.4 5.70e-13
membrane Hs cellular component 72.4 5.70e-13
histone deacetylase binding Hs molecular function 72.4 5.70e-13
cell projection Hs cellular component 1153 0.0
host cell Hs cellular component 72.4 5.70e-13
nuclear import signal receptor activity Hs molecular function 72.4 5.70e-13
extracellular exosome Hs cellular component 89.7 4.51e-18
ciliary base Hs cellular component 1153 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
binding SUPERFAMILY molecular function 8.65E-68
protein binding Pfam molecular function 9.8E-6