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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

COL21A1; ITGA11; ITGAX

Species

P.mammillata

Unique Gene ID

Phmamm.g00000018

Gene Model ID

Phmamm.CG.MTP2014.S1.g00018

Location

S1:176098..180499

Transcript Models and Sequences

  Phmamm.CG.MTP2014.S1.g00018.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Integrin_alpha_N Gene3D Integrin alpha, N-terminal
VWF_A ProSiteProfiles von Willebrand factor, type A
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
VWF_A SMART von Willebrand factor, type A
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
VWF_A Pfam von Willebrand factor, type A

GOSlim

24 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum lumen Blast cellular component
cytosol Blast cellular component
plasma membrane Blast cellular component
focal adhesion Blast cellular component
cell adhesion Blast biological process
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
metal ion binding Blast molecular function
macromolecular complex binding Blast molecular function
macromolecular complex Blast cellular component
integral component of plasma membrane Blast cellular component
plasma membrane part Blast cellular component
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
bounding membrane of organelle Blast cellular component
extracellular region part Blast cellular component
cell surface receptor signaling pathway Blast biological process
transmembrane signaling receptor activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
receptor activity Hs molecular function 75.1 2.24e-14
protein binding Hs molecular function 75.1 2.24e-14
collagen binding Hs molecular function 81.3 2.13e-16
extracellular region Hs cellular component 78.2 2.34e-15
proteinaceous extracellular matrix Hs cellular component 78.2 2.34e-15
collagen trimer Hs cellular component 78.2 2.34e-15
cytoplasm Hs cellular component 78.2 2.34e-15
endoplasmic reticulum lumen Hs cellular component 78.2 2.34e-15
cytosol Hs cellular component 78.2 2.34e-15
plasma membrane Hs cellular component 81.3 2.13e-16
focal adhesion Hs cellular component 81.3 2.13e-16
integrin complex Hs cellular component 81.3 2.13e-16
external side of plasma membrane Hs cellular component 75.1 2.24e-14
cell surface Hs cellular component 75.1 2.24e-14
membrane Hs cellular component 81.3 2.13e-16
integral component of membrane Hs cellular component 81.3 2.13e-16
secretory granule membrane Hs cellular component 75.1 2.24e-14
extracellular matrix Hs cellular component 78.2 2.34e-15
integrin alpha11-beta1 complex Hs cellular component 81.3 2.13e-16
collagen receptor activity Hs molecular function 81.3 2.13e-16
metal ion binding Hs molecular function 81.3 2.13e-16
tertiary granule membrane Hs cellular component 75.1 2.24e-14
collagen binding involved in cell-matrix adhesion Hs molecular function 81.3 2.13e-16
ficolin-1-rich granule membrane Hs cellular component 75.1 2.24e-14

GO (InterProScan)

No result

GO Term Analysis Type e-value